Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47900 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-71 271.9 130 100.0
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-10 67.4 40 87.5
BolC3t17676H Brassica oleracea HOM05D000313 ORTHO05D000065 9.3e-10 67.4 40 87.5
BraA03t14450Z Brassica rapa HOM05D000313 ORTHO05D000065 9.3e-10 67.4 40 85.0
C02p44290 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 48 70.8
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 40 85.0
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-09 66.2 40 85.0
BcaB02g09369 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 65.9 40 85.0
BcaB06g27821 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 65.9 40 85.0
BcaC02g08765 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 65.9 40 85.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 65.9 40 85.0
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 69 58.0
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-09 65.9 40 85.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-09 64.3 40 82.5
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-09 64.3 40 82.5
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-08 63.9 61 59.0
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 63.9 61 59.0
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 63.9 61 59.0
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 63.9 61 59.0
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-08 63.9 61 59.0
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-08 63.2 64 56.2
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-08 63.2 64 56.2
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.2 61 59.0
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.8 40 80.0
A08p07620 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 39 82.1
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 40 82.5
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-08 62.8 40 80.0
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-08 62.4 67 56.7
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-08 62.4 40 80.0
BcaC04g19952 Brassica carinata HOM05D000313 ORTHO05D016091 3.9e-08 62.0 56 58.9
BolC1t00606H Brassica oleracea HOM05D000313 ORTHO05D016091 3.9e-08 62.0 56 58.9
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-08 61.2 61 57.4
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-08 61.2 61 57.4
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 6.6e-08 61.2 61 57.4
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-08 61.2 126 38.9
BcaC06g35179 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-08 60.8 51 60.8
C07p18920 Brassica napus HOM05D000313 ORTHO05D000065 8.7e-08 60.8 51 60.8
BcaC05g26827 Brassica carinata HOM05D000313 ORTHO05D016091 1.1e-07 60.5 40 77.5
C08p36900 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.5 60 56.7
BolC9t59538H Brassica oleracea HOM05D000313 ORTHO05D016091 1.1e-07 60.5 40 77.5
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 40 77.5
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-07 60.1 58 58.6
BcaB05g22277 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.3 40 77.5
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.3 40 77.5
BcaC07g39596 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.3 40 77.5
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.3 40 77.5
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.3 77 49.4
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.3 61 54.1
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-07 58.9 92 43.5
BcaB01g04375 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.5 107 39.3
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.5 40 75.0
C01p44800 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.5 51 58.8
BcaB05g23187 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-07 58.2 40 75.0
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.2 61 54.1
C04p39210 Brassica napus HOM05D000313 ORTHO05D016091 5.6e-07 58.2 40 75.0
BcaC01g02770 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 57.8 40 75.0
BcaC03g14917 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 57.8 40 77.5
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 57.8 63 52.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 69 50.7
C02p23980 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 40 77.5
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-07 57.8 38 76.3
BraA06t25243Z Brassica rapa HOM05D010357 ORTHO05D000065 7.3e-07 57.8 39 76.9
C01p40820 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 51 58.8
C02p38590 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 37 78.4
BolC1t04039H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-07 57.4 51 58.8
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-07 57.4 37 78.4
C04p25640 Brassica napus HOM05D010357 ORTHO05D015494 1.3e-06 57.0 107 40.2
C05p50910 Brassica napus HOM05D010357 ORTHO05D015494 1.3e-06 57.0 107 40.2
BolC4t24245H Brassica oleracea HOM05D010357 ORTHO05D015494 1.3e-06 57.0 107 40.2
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-06 57.0 38 76.3
BcaB04g18221 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 56.6 40 72.5
C06p34380 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 32 84.4
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.2 40 75.0
BcaC09g48884 Brassica carinata HOM05D010891 ORTHO05D014503 2.1e-06 56.2 51 56.9
BolC1t04448H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 56.2 51 56.9
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 56.2 40 75.0
BolC9t57614H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 56.2 51 56.9
BraA08t32657Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-06 56.2 51 56.9
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-06 56.2 38 73.7
BcaB03g15004 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 40 72.5
A01p22490 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 55.8 40 70.0
BcaC01g02161 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.1 38 73.7
BcaC02g10599 Brassica carinata HOM05D010357 ORTHO05D015494 4.8e-06 55.1 52 59.6
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 38 73.7
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-06 55.1 38 73.7
BcaC09g49253 Brassica carinata HOM05D000313 ORTHO05D000065 6.2e-06 54.7 51 54.9
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-06 54.7 61 50.8
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-06 54.7 38 73.7
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 6.2e-06 54.7 61 50.8


User provided reference genes

Program Settings