Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 5.9e-45 183.7 86 100.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 6.7e-25 117.1 79 69.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 6.7e-25 117.1 55 94.5
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 6.7e-25 117.1 55 94.5
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 6.7e-25 117.1 79 69.6
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 6.7e-25 117.1 79 68.4
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 2.0e-24 115.5 79 67.1
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 2.6e-24 115.2 79 67.1
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 4.4e-24 114.4 79 65.8
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 9.7e-24 113.2 79 64.6
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.7e-23 112.5 76 69.7
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.2e-23 112.1 79 64.6
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 4.8e-23 110.9 56 83.9
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.4e-22 108.6 79 63.3
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.4e-22 108.6 74 66.2
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.1e-22 108.2 55 83.6
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 3.1e-22 108.2 79 62.0
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 3.1e-22 108.2 77 64.9
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 4.1e-22 107.8 79 63.3
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 5.3e-22 107.5 55 83.6
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 5.3e-22 107.5 55 83.6
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 5.3e-22 107.5 80 61.2
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 5.3e-22 107.5 55 85.5
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 5.3e-22 107.5 55 85.5
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 5.3e-22 107.5 56 82.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 5.3e-22 107.5 55 83.6
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 7.0e-22 107.1 77 63.6
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 7.0e-22 107.1 55 83.6
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 7.0e-22 107.1 55 83.6
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 7.0e-22 107.1 79 62.0
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.1e-22 106.7 77 63.6
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.1e-22 106.7 77 63.6
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 9.1e-22 106.7 77 63.6
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.2e-21 106.3 55 81.8
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.2e-21 106.3 53 86.8
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.0e-21 105.5 55 81.8
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.0e-21 105.5 55 81.8
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.0e-21 105.5 74 66.2
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 2.0e-21 105.5 53 84.9
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 2.0e-21 105.5 80 61.2
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 2.7e-21 105.1 55 83.6
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.7e-21 105.1 74 64.9
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 2.7e-21 105.1 74 64.9
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 2.7e-21 105.1 74 64.9
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 3.5e-21 104.8 79 59.5
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 3.5e-21 104.8 55 80.0
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.5e-21 104.8 80 61.2
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.5e-21 104.8 80 62.5
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.5e-21 104.8 79 60.8
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 3.5e-21 104.8 79 59.5
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.5e-21 104.4 80 58.8
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 5.9e-21 104.0 76 64.5
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.9e-21 104.0 79 60.8
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.9e-21 104.0 55 80.0
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 7.7e-21 103.6 53 83.0
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.0e-20 103.2 53 83.0
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.0e-20 103.2 55 78.2
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 1.3e-20 102.8 56 78.6
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.3e-20 102.8 79 59.5
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.3e-20 102.8 55 80.0
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.3e-20 102.8 56 80.4
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 1.3e-20 102.8 77 61.0
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.7e-20 102.4 46 100.0
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.2e-20 102.1 55 78.2
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.2e-20 102.1 55 78.2
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 2.2e-20 102.1 58 74.1
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.9e-20 101.7 53 83.0
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 2.9e-20 101.7 53 83.0
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 3.8e-20 101.3 76 60.5
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 5.0e-20 100.9 56 75.0
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 5.0e-20 100.9 76 60.5
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 5.0e-20 100.9 55 78.2
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 6.5e-20 100.5 56 78.6
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.5e-20 100.5 56 76.8
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 6.5e-20 100.5 77 59.7
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 8.5e-20 100.1 79 57.0
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.1e-19 99.8 77 59.7
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.5e-19 99.4 79 57.0
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.9e-19 99.0 77 58.4
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.9e-19 99.0 77 61.0
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.9e-19 99.0 77 61.0
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 3.2e-19 98.2 53 77.4
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 3.2e-19 98.2 56 75.0
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.5e-19 97.4 77 57.1
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 7.2e-19 97.1 77 57.1
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 9.4e-19 96.7 85 54.1
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 2.1e-18 95.5 56 71.4
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 2.7e-18 95.1 77 55.8
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.6e-18 94.7 78 55.1
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 4.7e-18 94.4 53 75.5
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 6.1e-18 94.0 58 70.7
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.8e-17 92.4 78 53.8
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.8e-17 92.4 87 50.6
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.3e-17 92.0 56 73.2
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 6.8e-17 90.5 54 77.8
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 6.8e-17 90.5 63 66.7
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 8.8e-17 90.1 79 53.2
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 8.8e-17 90.1 79 53.2
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.2e-16 89.7 57 68.4
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 2.0e-16 89.0 80 52.5
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.0e-16 89.0 80 52.5
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.0e-16 89.0 80 52.5
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.6e-16 88.6 57 66.7
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 2.6e-16 88.6 76 53.9
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 4.4e-16 87.8 53 71.7
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 4.4e-16 87.8 77 53.2
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 5.7e-16 87.4 55 70.9
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 7.5e-16 87.0 85 48.2
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 9.8e-16 86.7 79 51.9
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 9.8e-16 86.7 112 42.9
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 9.8e-16 86.7 82 50.0
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.3e-15 86.3 74 55.4
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.3e-15 86.3 55 67.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 4.8e-15 84.3 45 82.2
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.8e-14 82.4 55 65.5
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.1e-14 81.6 77 50.6
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 7.0e-14 80.5 80 47.5
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.2e-13 79.7 57 59.6
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.0e-13 79.0 77 49.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.0e-12 76.6 76 47.4
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 6.6e-12 73.9 77 49.4
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.7e-07 59.3 32 71.9
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.2e-07 58.9 33 72.7
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.9e-07 57.8 31 74.2


User provided reference genes

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