Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47400 Brassica napus HOM05D013831 ORTHO05D019913 4.3e-89 331.3 162 100.0
C07p10180 Brassica napus HOM05D013831 ORTHO05D019913 3.4e-62 241.9 116 100.0
BcaC01g00491 Brassica carinata HOM05D013831 ORTHO05D019913 6.5e-61 237.7 123 93.5
BcaC08g46041 Brassica carinata HOM05D013831 ORTHO05D094710 2.3e-42 176.0 84 97.6
BcaC09g48639 Brassica carinata HOM05D013831 ORTHO05D019913 1.4e-39 166.8 86 93.0
BolC1t04709H Brassica oleracea HOM05D013831 ORTHO05D019913 2.0e-38 162.9 77 98.7
C03p80610 Brassica napus HOM05D013831 ORTHO05D019913 1.7e-24 116.7 53 98.1
BolC3t20304H Brassica oleracea HOM05D013831 ORTHO05D019913 2.2e-24 116.3 52 100.0
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 2.6e-09 66.2 38 76.3
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 7.5e-09 64.7 38 73.7
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 4.9e-08 62.0 38 65.8
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 4.9e-08 62.0 36 69.4
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 1.1e-07 60.8 38 63.2
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.1e-07 60.8 38 63.2
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.1e-07 60.8 38 63.2
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 1.1e-07 60.8 38 65.8
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.4e-07 60.5 38 60.5
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.8e-07 60.1 38 63.2
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 1.8e-07 60.1 36 77.8
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 1.8e-07 60.1 36 77.8
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 1.8e-07 60.1 36 77.8
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 1.8e-07 60.1 36 77.8
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 1.8e-07 60.1 36 77.8
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 3.1e-07 59.3 38 63.2
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 1.6e-06 57.0 38 57.9


User provided reference genes

Program Settings