Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47330 Brassica napus HOM05D024965 ORTHO05D023981 3.3e-104 381.7 196 100.0
BolC1t04703H Brassica oleracea HOM05D024965 ORTHO05D023981 3.3e-104 381.7 196 100.0
BcaB04g20872 Brassica carinata HOM05D000196 ORTHO05D000279 1.5e-48 196.8 348 43.1
BraA01t03798Z Brassica rapa HOM05D024965 ORTHO05D023981 1.3e-47 193.7 123 87.8
BcaB04g18912 Brassica carinata HOM05D000196 ORTHO05D000279 6.0e-37 158.3 341 38.4
A05p32790 Brassica napus HOM05D000196 ORTHO05D000279 5.3e-33 145.2 387 37.7
BraA03t13145Z Brassica rapa HOM05D000196 ORTHO05D000279 1.2e-32 144.1 352 37.5
A03p39970 Brassica napus HOM05D000196 ORTHO05D000279 2.0e-32 143.3 347 36.6
Sp3g15100 Schrenkiella parvula HOM05D000196 ORTHO05D000279 2.9e-31 139.4 402 35.1
BcaC05g28843 Brassica carinata HOM05D000196 ORTHO05D000279 4.2e-30 135.6 392 36.5
C05p49490 Brassica napus HOM05D000196 ORTHO05D000279 4.2e-30 135.6 392 36.5
AT3G16857 Arabidopsis thaliana HOM05D000196 ORTHO05D000279 1.6e-29 133.7 389 34.4
BcaC01g03800 Brassica carinata HOM05D000196 ORTHO05D000279 1.6e-29 133.7 347 35.2
C03p48490 Brassica napus HOM05D000196 ORTHO05D000279 1.6e-29 133.7 347 35.2
BolC3t17126H Brassica oleracea HOM05D000196 ORTHO05D000279 1.6e-29 133.7 347 35.2
BolC5t33699H Brassica oleracea HOM05D000196 ORTHO05D000279 1.3e-28 130.6 392 36.0
BraA05t22101Z Brassica rapa HOM05D000196 ORTHO05D000279 1.1e-27 127.5 393 35.1
BcaC09g48645 Brassica carinata HOM05D024965 ORTHO05D023981 1.5e-27 127.1 68 92.6
Carub.0003s1657 Capsella rubella HOM05D000196 ORTHO05D000279 4.3e-27 125.6 390 33.8
CARHR092120 Cardamine hirsuta HOM05D000196 ORTHO05D000279 9.6e-27 124.4 369 34.7
AL3G29820 Arabidopsis lyrata HOM05D000196 ORTHO05D000279 1.6e-26 123.6 389 33.2
Thhalv10020213m.g Eutrema salsugineum HOM05D000196 ORTHO05D000279 4.0e-25 119.0 251 40.2
BcaB06g25782 Brassica carinata HOM05D000196 ORTHO05D000279 3.2e-22 109.4 397 33.2
Aa31LG10G6070 Aethionema arabicum HOM05D000196 ORTHO05D000279 8.5e-15 84.7 400 28.8
BolC1t02634H Brassica oleracea HOM05D000196 ORTHO05D000279 1.6e-13 80.5 360 29.2
Carub.0007s2550 Capsella rubella HOM05D000196 ORTHO05D000279 3.6e-13 79.3 406 29.6
C07p47650 Brassica napus HOM05D000196 ORTHO05D000279 7.9e-13 78.2 339 29.5
BcaC09g48644 Brassica carinata HOM05D000196 ORTHO05D000279 1.8e-12 77.0 43 90.7
BcaNung00228 Brassica carinata HOM05D000196 ORTHO05D000279 1.8e-12 77.0 374 27.5
BcaC09g50296 Brassica carinata HOM05D000196 ORTHO05D000279 3.9e-12 75.9 359 27.6
C01p26890 Brassica napus HOM05D000196 ORTHO05D000279 3.9e-12 75.9 359 27.6
BcaC06g33469 Brassica carinata HOM05D000196 ORTHO05D000279 2.5e-11 73.2 131 41.2
BolC7t45288H Brassica oleracea HOM05D000196 ORTHO05D000279 2.5e-11 73.2 131 41.2
AL7G39060 Arabidopsis lyrata HOM05D000196 ORTHO05D000279 3.3e-11 72.8 397 28.5
CARHR290740 Cardamine hirsuta HOM05D000196 ORTHO05D000279 3.3e-11 72.8 373 29.0
A01p21540 Brassica napus HOM05D000196 ORTHO05D000279 4.3e-11 72.4 361 27.4
BraA01t02061Z Brassica rapa HOM05D000196 ORTHO05D000279 4.3e-11 72.4 361 27.4
Aa31LG8G3930 Aethionema arabicum HOM05D000196 ORTHO05D000279 2.8e-10 69.7 401 29.9
THA.LOC104820279 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 6.9e-09 65.1 128 45.3
BcaC06g32985 Brassica carinata HOM05D000196 ORTHO05D000279 9.1e-09 64.7 91 52.7
BcaC05g29427 Brassica carinata HOM05D024965 ORTHO05D023981 1.5e-08 63.9 35 85.7
A03p49590 Brassica napus HOM05D000196 ORTHO05D000279 2.9e-07 59.7 131 38.2
BraA03t14056Z Brassica rapa HOM05D000196 ORTHO05D000279 2.9e-07 59.7 131 38.2
Sp7g14570 Schrenkiella parvula HOM05D000196 ORTHO05D000279 1.4e-06 57.4 412 24.8
Thhalv10024686m.g Eutrema salsugineum HOM05D000196 ORTHO05D000279 2.5e-06 56.6 114 45.6
GSVIVG01035051001 Vitis vinifera HOM05D000196 ORTHO05D000279 3.2e-06 56.2 264 29.9


User provided reference genes

Program Settings