Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47190 Brassica napus HOM05D000256 ORTHO05D000119 1.8e-44 182.2 93 100.0
A01p37260 Brassica napus HOM05D000256 ORTHO05D000119 1.7e-42 175.6 93 98.9
BraA01t03786Z Brassica rapa HOM05D000256 ORTHO05D000119 7.0e-36 153.7 94 87.2
C01p47210 Brassica napus HOM05D000256 ORTHO05D000119 9.2e-36 153.3 94 87.2
BcaC09g48660 Brassica carinata HOM05D000256 ORTHO05D000119 1.7e-34 149.1 76 100.0
BolC1t04690H Brassica oleracea HOM05D000256 ORTHO05D000119 1.7e-34 149.1 76 100.0
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 8.3e-29 130.2 76 89.5
BcaC09g48659 Brassica carinata HOM05D000256 ORTHO05D000119 4.1e-28 127.9 76 88.2
BolC1t04691H Brassica oleracea HOM05D000256 ORTHO05D000119 4.1e-28 127.9 76 88.2
Thhalv10022076m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 8.9e-23 110.2 76 75.0
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 7.1e-20 100.5 77 70.1
Carub.0003s1682 Capsella rubella HOM05D000256 ORTHO05D000119 1.3e-18 96.3 62 72.6
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 6.6e-18 94.0 69 66.7
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 3.3e-17 91.7 76 64.5
BcaC07g37952 Brassica carinata HOM05D000256 ORTHO05D000119 9.6e-17 90.1 77 66.2
A08p12430 Brassica napus HOM05D000256 ORTHO05D000119 9.6e-17 90.1 77 66.2
BolC8t48334H Brassica oleracea HOM05D000256 ORTHO05D000119 9.6e-17 90.1 77 66.2
BraA08t33213Z Brassica rapa HOM05D000256 ORTHO05D000119 9.6e-17 90.1 77 66.2
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.2e-16 89.7 62 74.2
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 4.0e-15 84.7 76 60.5
BcaC05g28829 Brassica carinata HOM05D000256 ORTHO05D000119 1.2e-14 83.2 77 59.7
BolC5t33677H Brassica oleracea HOM05D014510 ORTHO05D000119 1.2e-14 83.2 77 59.7
BcaB06g25801 Brassica carinata HOM05D000256 ORTHO05D000119 1.3e-13 79.7 77 59.7
BcaC09g48649 Brassica carinata HOM05D000256 ORTHO05D000119 1.9e-12 75.9 87 50.6
C01p47280 Brassica napus HOM05D000256 ORTHO05D000119 1.9e-12 75.9 87 50.6
BolC1t04698H Brassica oleracea HOM05D000256 ORTHO05D000119 1.9e-12 75.9 87 50.6
A01p37340 Brassica napus HOM05D000256 ORTHO05D000119 6.0e-11 70.9 87 47.1
BraA01t03793Z Brassica rapa HOM05D000256 ORTHO05D000119 6.0e-11 70.9 87 47.1
Thhalv10022192m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.0e-10 70.1 50 64.0
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.0e-10 70.1 72 52.8
Carub.0003s1672 Capsella rubella HOM05D000256 ORTHO05D000119 1.7e-10 69.3 49 65.3
THA.LOC104812007 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 2.3e-10 68.9 57 57.9
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 3.9e-10 68.2 50 62.0
Aa31LG2G15350 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.1e-09 66.6 43 67.4
Aa31LG2G15930 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.1e-09 66.6 43 67.4
AL3G29950 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.1e-09 66.6 76 48.7
Aa31LG2G15360 Aethionema arabicum HOM05D000256 ORTHO05D000119 2.5e-09 65.5 67 50.7
Aa31LG3G15170 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.6e-09 64.3 83 41.0
Aa31LG7G1710 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.6e-09 64.3 67 47.8
BcaB04g18372 Brassica carinata HOM05D000256 ORTHO05D000119 5.6e-09 64.3 48 66.7
Aa31LG2G14660 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.3e-09 63.9 72 48.6
THA.LOC104814028 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 1.3e-08 63.2 59 52.5
AT3G16970 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.6e-08 62.8 76 44.7
C09p45330 Brassica napus HOM05D000256 ORTHO05D000119 2.1e-08 62.4 38 78.9
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 3.6e-08 61.6 81 42.0
BcaC07g37967 Brassica carinata HOM05D000256 ORTHO05D000119 3.6e-08 61.6 48 62.5
BcaC07g37968 Brassica carinata HOM05D000256 ORTHO05D000119 3.6e-08 61.6 48 62.5
BolC8t48347H Brassica oleracea HOM05D000256 ORTHO05D000119 3.6e-08 61.6 48 62.5
BraA08t33226Z Brassica rapa HOM05D000256 ORTHO05D000119 3.6e-08 61.6 48 62.5
Thhalv10015241m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.6e-08 61.6 80 45.0
Aa31LG2G14620 Aethionema arabicum HOM05D000256 ORTHO05D000119 6.2e-08 60.8 73 47.9
Aa31LG2G15300 Aethionema arabicum HOM05D000256 ORTHO05D000119 8.1e-08 60.5 74 45.9
Aa31LG2G15310 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.4e-07 59.7 62 51.6
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.8e-07 59.3 48 60.4
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 2.4e-07 58.9 96 40.6
Phvul.011G169266 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.1e-07 58.5 71 43.7
AL3G29940 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 4.0e-07 58.2 87 40.2
BcaC06g32996 Brassica carinata HOM05D000256 ORTHO05D000119 4.0e-07 58.2 48 60.4
C05p49350 Brassica napus HOM05D014510 ORTHO05D000119 5.3e-07 57.8 61 55.7
Aa31LG2G14670 Aethionema arabicum HOM05D000256 ORTHO05D000119 6.9e-07 57.4 64 42.2
Aa31LG7G1500 Aethionema arabicum HOM05D000256 ORTHO05D000119 6.9e-07 57.4 70 42.9
A09p43180 Brassica napus HOM05D000256 ORTHO05D000119 6.9e-07 57.4 49 57.1
Aa31LG2G15330 Aethionema arabicum HOM05D000256 ORTHO05D000119 9.0e-07 57.0 59 50.8
Aa31LG7G1640 Aethionema arabicum HOM05D000256 ORTHO05D000119 9.0e-07 57.0 67 43.3
BraA03t09878Z Brassica rapa HOM05D000256 ORTHO05D000119 9.0e-07 57.0 73 46.6
BcaB01g05431 Brassica carinata HOM05D000256 ORTHO05D000119 1.2e-06 56.6 74 43.2
Aa31LG10G5930 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.5e-06 56.2 48 58.3
Aa31sc739G70 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.5e-06 56.2 64 42.2
Eucgr.H02834 Eucalyptus grandis HOM05D000256 ORTHO05D000119 1.5e-06 56.2 44 59.1
RcHm_v2.0_Chr4g0389421 Rosa chinensis HOM05D000256 ORTHO05D000119 1.5e-06 56.2 70 41.4
TWI77G1024 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 1.5e-06 56.2 72 47.2
C03p06240 Brassica napus HOM05D000560 ORTHO05D000119 2.0e-06 55.8 73 41.1
CARHR222580 Cardamine hirsuta HOM05D000256 ORTHO05D000119 2.0e-06 55.8 48 58.3
A02p05710 Brassica napus HOM05D000256 ORTHO05D000119 2.6e-06 55.5 48 58.3
BNapus_Darmor_BZH_scaffold_38p02240 Brassica napus HOM05D000256 ORTHO05D000119 2.6e-06 55.5 48 58.3
BraA02t05523Z Brassica rapa HOM05D000256 ORTHO05D000119 2.6e-06 55.5 48 58.3
Prupe.1G055500 Prunus persica HOM05D000256 ORTHO05D000119 2.6e-06 55.5 70 47.1
RcHm_v2.0_Chr4g0389011 Rosa chinensis HOM05D000256 ORTHO05D000119 2.6e-06 55.5 70 41.4
CARHR259490 Cardamine hirsuta HOM05D000256 ORTHO05D000119 3.4e-06 55.1 49 51.0
Phvul.011G168800 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 3.4e-06 55.1 59 45.8
Prupe.1G055600 Prunus persica HOM05D000256 ORTHO05D000119 3.4e-06 55.1 79 43.0
PGR042G0022 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G0549 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G0996 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G1053 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G1377 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G1542 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G1949 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G2280 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G2642 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G3183 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G3343 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
PGR042G3721 Punica granatum HOM05D000256 ORTHO05D000119 3.4e-06 55.1 74 43.2
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 4.4e-06 54.7 64 45.3
AT5G12060 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 4.4e-06 54.7 47 59.6
Aa31LG7G1490 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.8e-06 54.3 70 41.4
Aa31LG2G14650 Aethionema arabicum HOM05D000256 ORTHO05D000119 7.6e-06 53.9 68 44.1
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 7.6e-06 53.9 91 39.6
C03p06280 Brassica napus HOM05D000256 ORTHO05D000119 7.6e-06 53.9 41 61.0
BolC3t13135H Brassica oleracea HOM05D000256 ORTHO05D000119 7.6e-06 53.9 41 61.0
THA.LOC104814027 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 7.6e-06 53.9 59 45.8
BcaC06g33456 Brassica carinata HOM05D000256 ORTHO05D000119 9.9e-06 53.5 94 40.4
A03p49670 Brassica napus HOM05D000256 ORTHO05D000119 9.9e-06 53.5 94 40.4
C07p47740 Brassica napus HOM05D000256 ORTHO05D000119 9.9e-06 53.5 94 40.4
BolC3t13131H Brassica oleracea HOM05D000560 ORTHO05D000119 9.9e-06 53.5 73 42.5
BraA03t14066Z Brassica rapa HOM05D000256 ORTHO05D000119 9.9e-06 53.5 94 40.4
Ciclev10017715m.g Citrus clementina HOM05D000256 ORTHO05D000119 9.9e-06 53.5 45 55.6
MD17G1123000 Malus domestica HOM05D000256 ORTHO05D000119 9.9e-06 53.5 74 44.6


User provided reference genes

Program Settings