Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 1.5e-69 266.2 142 100.0
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 1.2e-63 246.5 131 100.0
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 5.5e-56 221.1 120 99.2
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 7.4e-53 210.7 131 89.3
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 8.5e-49 197.2 128 87.5
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 8.5e-49 197.2 140 80.0
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.1e-48 196.8 128 88.3
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 2.5e-48 195.7 137 82.5
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 9.4e-48 193.7 123 88.6
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 2.1e-47 192.6 130 85.4
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.7e-47 192.2 130 84.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.8e-46 189.5 123 87.0
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 8.8e-46 187.2 121 86.0
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 8.2e-44 180.6 117 87.2
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-42 175.6 120 83.3
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.4e-35 153.3 130 72.3
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 1.7e-33 146.4 118 74.6
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 3.8e-33 145.2 127 70.9
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 2.1e-23 112.8 123 61.0
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 8.8e-22 107.5 120 61.7
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 9.8e-21 104.0 67 88.1
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 1.7e-20 103.2 126 55.6
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 2.8e-20 102.4 123 59.3
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.8e-20 102.4 123 59.3
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 3.7e-20 102.1 120 60.8
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.7e-20 102.1 120 60.0
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 5.4e-19 98.2 124 55.6
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 2.7e-18 95.9 119 58.8
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 4.5e-18 95.1 124 56.5
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 1.3e-17 93.6 124 54.8
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 1.7e-17 93.2 127 55.1
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 4.2e-16 88.6 66 74.2
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 7.2e-16 87.8 76 67.1
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 7.2e-16 87.8 76 67.1
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-14 83.6 86 62.8
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 1.3e-12 77.0 67 68.7
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 2.8e-12 75.9 83 61.4
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 1.4e-11 73.6 82 58.5
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 5.4e-11 71.6 105 53.3
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 2.7e-10 69.3 74 62.2
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 2.7e-10 69.3 113 50.4
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 3.5e-10 68.9 74 58.1
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 3.5e-10 68.9 74 58.1
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 5.9e-10 68.2 70 61.4
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 7.8e-10 67.8 73 63.0
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-09 65.9 69 60.9
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 3.8e-09 65.5 70 64.3
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 5.0e-09 65.1 69 63.8
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 5.0e-09 65.1 67 67.2
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 5.0e-09 65.1 69 60.9
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 5.0e-09 65.1 70 64.3
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 8.6e-09 64.3 57 68.4
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 8.6e-09 64.3 69 59.4
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 8.6e-09 64.3 69 59.4
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 8.6e-09 64.3 67 61.2
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 8.6e-09 64.3 68 64.7
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 1.1e-08 63.9 68 64.7
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 1.5e-08 63.5 68 64.7
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 1.5e-08 63.5 68 64.7
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.9e-08 63.2 67 64.2
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 2.5e-08 62.8 66 65.2
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 2.5e-08 62.8 66 63.6
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-08 62.0 69 58.0
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 7.3e-08 61.2 67 59.7
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 7.3e-08 61.2 67 59.7
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 7.3e-08 61.2 67 59.7
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 9.5e-08 60.8 73 58.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 9.5e-08 60.8 75 52.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-07 60.1 74 52.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-07 58.9 69 55.1
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.0e-06 57.4 67 61.2
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.0e-06 55.8 66 60.6
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 4.0e-06 55.5 61 62.3


User provided reference genes

Program Settings