Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p46580 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-22 105.9 53 100.0
BolC1t04624H Brassica oleracea HOM05D000209 ORTHO05D000129 9.6e-22 105.9 53 100.0
A01p36710 Brassica napus HOM05D000209 ORTHO05D000129 4.8e-21 103.6 53 98.1
A01p36440 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-18 95.5 51 94.1
BraA01t03707Z Brassica rapa HOM05D002896 ORTHO05D003263 1.3e-18 95.5 51 94.1
BcaC09g48724 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-17 92.0 51 92.2
C01p46570 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-17 92.0 51 92.2
BolC1t04622H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-17 92.0 51 92.2
BcaB04g20830 Brassica carinata HOM05D000209 ORTHO05D000129 3.2e-17 90.9 51 92.2
A01p36700 Brassica napus HOM05D000209 ORTHO05D000129 4.6e-16 87.0 51 88.2
BraA01t03733Z Brassica rapa HOM05D000209 ORTHO05D000129 4.6e-16 87.0 51 88.2
BcaB04g20802 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-15 84.3 53 83.0
BcaB04g20801 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-14 82.4 56 80.4
BcaC09g48760 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-14 82.4 51 80.4
AT2G17310 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.0e-12 72.8 48 75.0
BcaB04g20442 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-11 71.6 58 69.0
BcaC09g48733 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-11 71.6 46 76.1
C01p46470 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-11 71.6 46 76.1
BolC1t04609H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-11 71.6 46 76.1
AL3G50200 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.6e-11 69.7 48 72.9
C01p46480 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-10 68.9 46 73.9
BcaB06g25830 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-10 67.8 49 69.4
CARHR107430 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.9e-10 67.8 52 63.5
BcaC01g03735 Brassica carinata HOM05D000209 ORTHO05D000129 4.9e-10 67.0 59 59.3
A01p36610 Brassica napus HOM05D000209 ORTHO05D000129 6.4e-10 66.6 46 71.7
BraA01t03726Z Brassica rapa HOM05D000209 ORTHO05D000129 6.4e-10 66.6 46 71.7
Thhalv10006465m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.4e-10 66.6 47 61.7
CARHR107420 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.1e-09 65.9 52 61.5
C03p49150 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-09 65.5 58 58.6
BolC3t17198H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-09 65.5 58 58.6
C05p48750 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-09 64.7 50 66.0
BolC5t33611H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-09 64.7 50 66.0
BraA05t22051Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-09 64.7 50 66.0
CARHR106550 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.4e-09 64.7 56 60.7
Carub.0003s3128 Capsella rubella HOM05D000209 ORTHO05D000129 9.3e-09 62.8 48 68.8
BcaB04g18962 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-08 62.4 58 58.6
BcaC05g28768 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-08 62.4 50 64.0
A03p58980 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-08 61.2 46 58.7
C07p57010 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-08 61.2 46 58.7
BolC3t17196H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-08 61.2 58 56.9
CARHR107440 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-08 61.2 53 66.0
BcaB04g18961 Brassica carinata HOM05D000209 ORTHO05D000129 4.6e-08 60.5 58 55.2
A03p40360 Brassica napus HOM05D000209 ORTHO05D000129 4.6e-08 60.5 58 56.9
C09p13320 Brassica napus HOM05D000209 ORTHO05D000129 4.6e-08 60.5 48 64.6
BolC9t54225H Brassica oleracea HOM05D000209 ORTHO05D000129 4.6e-08 60.5 48 64.6
Carub.0004s1987 Capsella rubella HOM05D000209 ORTHO05D000129 4.6e-08 60.5 53 56.6
BcaC01g03737 Brassica carinata HOM05D000209 ORTHO05D000129 7.9e-08 59.7 58 56.9
A05p32120 Brassica napus HOM05D000209 ORTHO05D000129 7.9e-08 59.7 60 58.3
Carub.0003s3132 Capsella rubella HOM05D000209 ORTHO05D000129 7.9e-08 59.7 47 59.6
BcaNung00477 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-07 59.3 46 56.5
BraA03t13186Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-07 58.9 58 55.2
Thhalv10015389m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-07 58.9 55 58.2
AT1G12190 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-07 58.5 46 58.7
A09p11310 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-07 58.5 48 60.4
BraA09t36769Z Brassica rapa HOM05D000209 ORTHO05D000129 1.8e-07 58.5 48 60.4
Carub.0003s1746 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-07 58.5 47 61.7
AL3G29400 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.3e-07 58.2 47 61.7
BcaC05g28761 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-07 58.2 46 63.0
AL3G29410 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-07 57.8 47 61.7
AL3G30870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-07 57.8 58 53.4
BcaC04g22980 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-07 57.8 48 60.4
AL1G23460 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.1e-07 57.0 46 54.3
AT3G59610 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.1e-07 57.0 45 55.6
BraA05t22041Z Brassica rapa HOM05D000209 ORTHO05D000129 5.1e-07 57.0 47 66.0
AL3G28990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-07 56.6 47 55.3
AL408U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-07 56.6 47 55.3
BcaC08g47298 Brassica carinata HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
A07p41580 Brassica napus HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
A07p41610 Brassica napus HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
C06p49990 Brassica napus HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
BolC6t40038H Brassica oleracea HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
BraA07t31687Z Brassica rapa HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
BraA07t31690Z Brassica rapa HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
Carub.0001s1187 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-07 56.6 46 54.3
AL3G30830 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.7e-07 56.2 55 60.0
CARHR091750 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.7e-07 56.2 47 59.6
AT3G51171 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 55.8 47 59.6
C05p48660 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-06 55.5 59 54.2
BolC5t33601H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-06 55.5 59 54.2
Carub.0004s1988 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-06 55.5 48 56.2
AT3G17710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.5e-06 54.7 55 56.4
CARHR148120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.5e-06 54.7 47 59.6
AL3G28960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.3e-06 54.3 48 56.2
AL3G28980 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.3e-06 54.3 48 56.2
AL1G53620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-06 53.9 45 53.3
AL2G17360 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-06 53.9 46 54.3
AL2G24874 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-06 53.9 43 62.8
AT3G16590 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.3e-06 53.9 56 55.4
BcaC05g29450 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-06 53.9 59 50.8
C05p57500 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-06 53.9 59 50.8
BolC5t34407H Brassica oleracea HOM05D000209 ORTHO05D000129 4.3e-06 53.9 59 50.8
Carub.0003s3133 Capsella rubella HOM05D000209 ORTHO05D000129 4.3e-06 53.9 51 54.9
AL3G29510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.4e-06 53.1 56 53.6
AT3G16555 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.4e-06 53.1 47 57.4
A05p38610 Brassica napus HOM05D000209 ORTHO05D000129 7.4e-06 53.1 46 56.5
AL4G34910 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.6e-06 52.8 52 50.0
BraA05t22652Z Brassica rapa HOM05D000209 ORTHO05D000129 9.6e-06 52.8 46 54.3
CARHR293570 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.6e-06 52.8 46 58.7


User provided reference genes

Program Settings