Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 0.0e+00 1157.9 680 100.0
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 7.2e-271 937.2 664 84.0
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 1.7e-179 633.6 824 53.4
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 9.3e-170 601.3 845 52.4
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 3.7e-166 589.3 841 52.3
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 1.5e-156 557.4 838 50.8
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 1.1e-154 551.2 877 50.1
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 5.1e-152 542.3 822 51.2
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 7.7e-148 528.5 849 49.2
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 7.7e-148 528.5 849 49.2
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 1.0e-147 528.1 849 49.0
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.4e-146 524.2 814 50.1
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 1.4e-146 524.2 814 50.1
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 4.0e-120 436.4 525 61.3
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 2.0e-116 424.1 853 44.4
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.3e-91 341.7 892 38.2
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.8e-86 323.6 916 36.2
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 1.2e-81 308.5 155 98.1
BolC1t04239H Brassica oleracea HOM05D004845 ORTHO05D005957 6.4e-62 243.0 127 96.9
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.1e-48 197.2 722 31.0
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 2.9e-46 191.0 888 31.0
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 3.2e-45 187.6 909 30.9
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 9.4e-45 186.0 894 32.2
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 2.7e-44 184.5 882 30.3
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 8.8e-43 179.5 829 30.8
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 3.3e-42 177.6 904 29.3
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.1e-40 172.6 906 29.4
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.4e-40 172.2 906 29.2
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 4.1e-40 170.6 906 29.5
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 9.1e-40 169.5 140 66.4
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 1.5e-39 168.7 135 65.2
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 3.4e-39 167.5 891 30.6
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.4e-39 167.5 890 29.3
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 4.5e-39 167.2 160 56.9
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.7e-38 165.2 122 68.9
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.7e-38 165.2 122 68.9
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 3.8e-38 164.1 870 30.1
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 3.8e-38 164.1 160 58.1
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 5.0e-38 163.7 122 71.3
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 1.4e-37 162.2 140 63.6
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.9e-37 161.8 121 70.2
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 2.5e-37 161.4 144 63.9
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 4.2e-37 160.6 140 62.1
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.6e-36 158.7 137 64.2
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 1.6e-36 158.7 122 66.4
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.6e-36 158.7 128 64.8
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 3.6e-36 157.5 139 61.9
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 3.6e-36 157.5 122 70.5
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 4.7e-36 157.1 140 62.1
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 6.1e-36 156.8 122 67.2
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 1.4e-35 155.6 123 66.7
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 1.4e-35 155.6 140 61.4
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 1.4e-35 155.6 121 66.9
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 1.4e-35 155.6 139 61.9
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 2.3e-35 154.8 139 61.2
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 2.3e-35 154.8 139 61.9
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 3.0e-35 154.5 137 62.0
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 3.0e-35 154.5 122 68.9
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 3.9e-35 154.1 123 66.7
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.9e-35 154.1 123 66.7
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 5.1e-35 153.7 123 66.7
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 5.1e-35 153.7 123 66.7
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 5.1e-35 153.7 121 65.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 5.1e-35 153.7 123 65.9
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 6.7e-35 153.3 121 66.1
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 8.8e-35 152.9 118 66.9
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.0e-34 151.8 146 59.6
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 2.0e-34 151.8 130 58.5
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 2.6e-34 151.4 899 27.4
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 4.4e-34 150.6 154 57.1
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 7.4e-34 149.8 895 26.8
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 1.3e-33 149.1 180 46.7
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.7e-33 148.7 864 29.6
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 1.7e-33 148.7 122 62.3
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 2.8e-33 147.9 123 63.4
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.8e-33 147.9 123 63.4
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 2.8e-33 147.9 121 66.1
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 2.8e-33 147.9 120 66.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.7e-33 147.5 132 60.6
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 4.8e-33 147.1 119 63.0
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 4.8e-33 147.1 141 58.2
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 8.2e-33 146.4 122 65.6
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.1e-32 146.0 120 63.3
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.4e-32 145.6 121 66.1
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.8e-32 145.2 120 62.5
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.8e-32 145.2 121 62.8
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 3.1e-32 144.4 121 63.6
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 3.1e-32 144.4 123 62.6
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 5.3e-32 143.7 121 62.0
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 7.0e-32 143.3 120 62.5
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 7.0e-32 143.3 159 52.2
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 7.0e-32 143.3 121 64.5
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 7.0e-32 143.3 121 64.5
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.2e-31 142.5 127 59.1
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.2e-31 142.5 122 64.8
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 2.6e-31 141.4 121 61.2
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 5.9e-31 140.2 121 59.5
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 8.5e-30 136.3 121 61.2
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.1e-29 136.0 121 60.3
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 2.5e-29 134.8 123 57.7
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 7.2e-29 133.3 105 65.7
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 8.0e-28 129.8 108 63.0
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 8.0e-28 129.8 121 58.7
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 3.9e-27 127.5 125 53.6
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 3.9e-27 127.5 125 53.6
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 3.9e-27 127.5 156 49.4
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 1.1e-24 119.4 87 67.8
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 2.9e-22 111.3 121 46.3
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 5.5e-21 107.1 119 47.9
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 1.2e-20 105.9 61 77.0
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 1.6e-20 105.5 68 72.1
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.1e-20 105.1 151 39.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 2.3e-19 101.7 151 40.4
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 5.2e-19 100.5 838 29.1
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 1.2e-15 89.4 121 43.0
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 3.5e-15 87.8 51 80.4
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.7e-12 78.2 571 27.7
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 4.7e-12 77.4 46 71.7
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 1.4e-11 75.9 410 24.9
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 1.5e-10 72.4 58 62.1
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 8.3e-09 66.6 580 26.7
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 1.6e-07 62.4 38 78.9
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 2.7e-07 61.6 312 26.9


User provided reference genes

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