Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p42340 Brassica napus HOM05D000769 ORTHO05D000598 4.4e-43 177.6 89 100.0
BraA01t03434Z Brassica rapa HOM05D000769 ORTHO05D000598 4.5e-24 114.4 85 75.3
BolC1t04189H Brassica oleracea HOM05D000769 ORTHO05D000598 1.1e-22 109.8 87 72.4
CARHR097830 Cardamine hirsuta HOM05D000769 ORTHO05D000598 5.2e-20 100.9 149 46.3
BcaB06g26289 Brassica carinata HOM05D000769 ORTHO05D000598 1.2e-19 99.8 149 45.6
A05p26900 Brassica napus HOM05D000769 ORTHO05D000598 1.2e-19 99.8 149 45.6
C05p41510 Brassica napus HOM05D000769 ORTHO05D000598 1.2e-19 99.8 149 45.6
BolC5t32889H Brassica oleracea HOM05D000769 ORTHO05D000598 1.2e-19 99.8 149 45.6
BraA05t21570Z Brassica rapa HOM05D000769 ORTHO05D000598 1.2e-19 99.8 149 45.6
AL3G36030 Arabidopsis lyrata HOM05D000769 ORTHO05D000598 1.5e-19 99.4 149 45.6
AT3G21870 Arabidopsis thaliana HOM05D000769 ORTHO05D000598 1.5e-19 99.4 149 45.6
Thhalv10021524m.g Eutrema salsugineum HOM05D000769 ORTHO05D000598 1.5e-19 99.4 149 45.6
BcaC09g49123 Brassica carinata HOM05D000769 ORTHO05D000598 2.6e-19 98.6 116 54.3
Sp3g19840 Schrenkiella parvula HOM05D000769 ORTHO05D000598 5.7e-19 97.4 149 44.3
Carub.0003s2194 Capsella rubella HOM05D000769 ORTHO05D000598 1.7e-18 95.9 149 44.3
BcaC05g28120 Brassica carinata HOM05D001891 ORTHO05D004048 9.1e-17 90.1 137 44.5
Aa31LG8G8430 Aethionema arabicum HOM05D000769 ORTHO05D000598 7.7e-16 87.0 149 41.6
A01p33110 Brassica napus HOM05D000769 ORTHO05D000598 1.0e-15 86.7 68 70.6
Nitab4.5_0015379g0010 Nicotiana tabacum HOM05D000769 ORTHO05D000598 1.0e-15 86.7 120 45.8
SGA_v2.0_scaffold159G37581 Striga asiatica HOM05D000769 ORTHO05D000598 1.6e-13 79.3 147 36.7
THA.LOC104808498 Tarenaya hassleriana HOM05D000769 ORTHO05D000598 1.6e-13 79.3 151 36.4
SalBow1G1108 Salvia bowleyana HOM05D000769 ORTHO05D000598 3.6e-13 78.2 151 37.1
MD09G1104900 Malus domestica HOM05D000769 ORTHO05D000598 4.7e-13 77.8 160 36.2
Rhsim06G0157900 Rhododendron simsii HOM05D000769 ORTHO05D000598 4.7e-13 77.8 157 36.3
VMungo1080G1525 Vigna mungo HOM05D000769 ORTHO05D000598 4.7e-13 77.8 167 34.7
Aqoxy4G02099 Aquilegia oxysepala HOM05D001891 ORTHO05D004048 6.1e-13 77.4 126 40.5
Migut.H01219 Erythranthe guttata HOM05D000769 ORTHO05D000598 6.1e-13 77.4 149 36.9
Glyma.12G195900 Glycine max HOM05D000769 ORTHO05D000598 6.1e-13 77.4 160 35.6
Glyma.13G306600 Glycine max HOM05D000769 ORTHO05D000598 6.1e-13 77.4 160 36.2
Atru.chr6.3150 Acer truncatum HOM05D000769 ORTHO05D000598 8.0e-13 77.0 153 36.6
Aqoxy4G02094 Aquilegia oxysepala HOM05D000769 ORTHO05D000598 1.0e-12 76.6 150 36.0
CANSAT64G1339 Cannabis sativa HOM05D000769 ORTHO05D000598 1.0e-12 76.6 148 36.5
Hma1.2p1_0613F.1_g189180 Hydrangea macrophylla HOM05D000769 ORTHO05D000598 2.3e-12 75.5 151 35.8
PGR142G2523 Punica granatum HOM05D000769 ORTHO05D000598 3.0e-12 75.1 150 36.0
Cfa014440 Carpinus fangiana HOM05D003137 ORTHO05D003433 4.0e-12 74.7 120 42.5
CDE05G1336 Ceratophyllum demersum HOM05D000769 ORTHO05D000598 4.0e-12 74.7 154 33.1
Gorai.005G209200 Gossypium raimondii HOM05D000769 ORTHO05D000598 4.0e-12 74.7 165 34.5
CDE05G1189 Ceratophyllum demersum HOM05D000769 ORTHO05D000598 6.8e-12 73.9 154 33.8
MBI02_g18406_MAGBIO Magnolia biondii HOM05D000769 ORTHO05D000598 6.8e-12 73.9 153 34.6
Peaxi162Scf00007g01226 Petunia axillaris HOM05D000769 ORTHO05D000598 6.8e-12 73.9 160 35.6
Haze_12900 Corylus avellana HOM05D000769 ORTHO05D000598 8.9e-12 73.6 120 41.7
Lj8A122T59 Lonicera japonica HOM05D000769 ORTHO05D000598 8.9e-12 73.6 151 36.4
TAR627G0891 Trochodendron aralioides HOM05D000769 ORTHO05D000598 8.9e-12 73.6 156 34.0
CAN.G921.3 Capsicum annuum HOM05D000769 ORTHO05D000598 1.2e-11 73.2 104 44.2
Lsat_1_v5_gn_3_43761 Lactuca sativa HOM05D000769 ORTHO05D000598 1.2e-11 73.2 114 40.4
Manes.13G073200 Manihot esculenta HOM05D000769 ORTHO05D000598 1.2e-11 73.2 153 34.6
Prupe.3G220600 Prunus persica HOM05D000769 ORTHO05D000598 1.2e-11 73.2 160 34.4
Cpa.g.sc8.237 Carica papaya HOM05D000769 ORTHO05D000598 1.5e-11 72.8 149 35.6
FvH4_6g43551 Fragaria vesca HOM05D000769 ORTHO05D000598 1.5e-11 72.8 160 33.8
Gohir.D02G186900 Gossypium hirsutum HOM05D000769 ORTHO05D000598 2.0e-11 72.4 165 33.9
RcHm_v2.0_Chr2g0160131 Rosa chinensis HOM05D000769 ORTHO05D000598 2.0e-11 72.4 160 33.8
Ca_01576_v3 Cicer arietinum L. HOM05D003137 ORTHO05D003433 2.6e-11 72.0 107 43.0
ECA246G3055 Erigeron canadensis HOM05D000769 ORTHO05D000598 3.4e-11 71.6 114 39.5
Nitab4.5_0001176g0120 Nicotiana tabacum HOM05D000769 ORTHO05D000598 5.7e-11 70.9 159 34.0
PGSC0003DMG400026170 Solanum tuberosum HOM05D000769 ORTHO05D000598 5.7e-11 70.9 104 43.3
Gohir.A03G163500 Gossypium hirsutum HOM05D000769 ORTHO05D000598 9.8e-11 70.1 165 33.3
EL10Ac8g19753 Beta vulgaris HOM05D000769 ORTHO05D000598 1.3e-10 69.7 112 37.5
DCAR_021188 Daucus carota HOM05D000769 ORTHO05D000598 1.3e-10 69.7 147 34.0
Cc05_g05150 Coffea canephora HOM05D000769 ORTHO05D000598 1.7e-10 69.3 165 32.7
Mapoly0100s0039 Marchantia polymorpha HOM05D000769 ORTHO05D000598 3.7e-10 68.2 161 31.7
HanXRQChr15g0479171 Helianthus annuus HOM05D000769 ORTHO05D000598 6.3e-10 67.4 158 32.3
Lalb_Chr24g0393081 Lupinus albus HOM05D000769 ORTHO05D000598 6.3e-10 67.4 118 39.8
Actinidia30508 Actinidia chinensis HOM05D000769 ORTHO05D000598 8.3e-10 67.0 88 45.5
Lj3g0018799 Lotus japonicus HOM05D000769 ORTHO05D000598 8.3e-10 67.0 46 73.9
ClCG02G008430 Citrullus lanatus HOM05D000769 ORTHO05D000598 1.4e-09 66.2 47 68.1
Duzib132G0662 Durio zibethinus HOM05D000769 ORTHO05D000598 1.8e-09 65.9 54 63.0
Phvul.005G113500 Phaseolus vulgaris HOM05D000769 ORTHO05D000598 2.4e-09 65.5 53 62.3
AagrBONN_evm.TU.Sc2ySwM_344.2864 Anthoceros agrestis HOM05D000769 ORTHO05D000598 3.1e-09 65.1 152 30.9
Pp3c24_6000 Physcomitrium patens HOM05D000769 ORTHO05D000598 5.4e-09 64.3 116 37.1
Nn1g03666 Nelumbo nucifera HOM05D000769 ORTHO05D000598 7.0e-09 63.9 47 66.0
FAN05G0260 Fragaria x ananassa HOM05D003137 ORTHO05D003433 1.2e-08 63.2 47 63.8
FAN14G4002 Fragaria x ananassa HOM05D003137 ORTHO05D003433 1.2e-08 63.2 47 63.8
Pp3c20_16040 Physcomitrium patens HOM05D000769 ORTHO05D000598 1.2e-08 63.2 117 35.0
Pp3c8_11940 Physcomitrium patens HOM05D000769 ORTHO05D000598 1.2e-08 63.2 115 36.5
Sed0011809 Sechium edule HOM05D000769 ORTHO05D000598 1.2e-08 63.2 47 68.1
vmacro12229 Vaccinium macrocarpon HOM05D000769 ORTHO05D000598 1.2e-08 63.2 47 63.8
Actinidia39287 Actinidia chinensis HOM05D000769 ORTHO05D000598 1.6e-08 62.8 47 66.0
Ciclev10016515m.g Citrus clementina HOM05D000769 ORTHO05D000598 2.0e-08 62.4 47 66.0
MELO3C019234.2 Cucumis melo HOM05D000769 ORTHO05D000598 2.7e-08 62.0 47 66.0
FAN02G1637 Fragaria x ananassa HOM05D003137 ORTHO05D003433 2.7e-08 62.0 47 61.7
Oeu011082.1 Olea europaea HOM05D000769 ORTHO05D000598 2.7e-08 62.0 47 63.8
ATR0804G024 Amborella trichopoda HOM05D000769 ORTHO05D000598 3.5e-08 61.6 47 63.8
CSS0025988 Camellia sinensis var. sinensis HOM05D000769 ORTHO05D000598 3.5e-08 61.6 47 66.0
COL.COLO4_12992 Corchorus olitorius HOM05D003137 ORTHO05D003433 3.5e-08 61.6 47 63.8
CsaV3_2G035200 Cucumis sativus L. HOM05D000769 ORTHO05D000598 3.5e-08 61.6 47 63.8
Dinv39685 Davidia involucrata HOM05D000769 ORTHO05D000598 3.5e-08 61.6 47 63.8
FAN06G3980 Fragaria x ananassa HOM05D000769 ORTHO05D000598 3.5e-08 61.6 46 63.0
FvH4_3g31690 Fragaria vesca HOM05D000769 ORTHO05D000598 4.5e-08 61.2 46 63.0
FvH4_7g02781 Fragaria vesca HOM05D000769 ORTHO05D000598 4.5e-08 61.2 46 63.0
Pp3c24_6020 Physcomitrium patens HOM05D000769 ORTHO05D000598 5.9e-08 60.8 157 29.9
Psat5g265360 Pisum sativum HOM05D000769 ORTHO05D000598 5.9e-08 60.8 46 65.2
FvH4_3g46120 Fragaria vesca HOM05D000769 ORTHO05D000598 7.8e-08 60.5 43 65.1
Medtr2g088860 Medicago truncatula HOM05D000769 ORTHO05D000598 7.8e-08 60.5 46 65.2
TPR.G4218 Trifolium pratense HOM05D000769 ORTHO05D000598 7.8e-08 60.5 46 65.2
Eucgr.K00862 Eucalyptus grandis HOM05D000769 ORTHO05D000598 1.0e-07 60.1 46 60.9
PSO541G4357 Papaver somniferum HOM05D000769 ORTHO05D000598 1.0e-07 60.1 46 63.0
MSTRG.12289 Avicennia marina HOM05D000769 ORTHO05D000598 1.3e-07 59.7 47 63.8
PSO675G8540 Papaver somniferum HOM05D000769 ORTHO05D000598 1.3e-07 59.7 46 63.0
Potri.007G121500 Populus trichocarpa HOM05D000769 ORTHO05D000598 1.3e-07 59.7 47 61.7
Thecc.02G162500 Theobroma cacao HOM05D000769 ORTHO05D000598 1.3e-07 59.7 47 61.7
GSVIVG01030626001 Vitis vinifera HOM05D000769 ORTHO05D000598 1.3e-07 59.7 47 61.7
Solyc07g052610.3 Solanum lycopersicum HOM05D000769 ORTHO05D000598 1.7e-07 59.3 43 69.8
Sopen07g026220 Solanum pennellii HOM05D000769 ORTHO05D000598 1.7e-07 59.3 43 69.8
arahy.Tifrunner.gnm1.ann1.PP5FG0 Arachis hypogaea HOM05D000769 ORTHO05D000598 2.3e-07 58.9 46 65.2
Pp3c8_10460 Physcomitrium patens HOM05D000769 ORTHO05D000598 2.9e-07 58.5 117 35.9
SEGI_26587 Sequoiadendron giganteum HOM05D000769 ORTHO05D000598 2.9e-07 58.5 46 60.9
TWI36G0024 Tripterygium wilfordii HOM05D000769 ORTHO05D000598 3.9e-07 58.2 46 58.7
Ah.09g228810 Amaranthus hybridus HOM05D000769 ORTHO05D000598 5.0e-07 57.8 52 53.8
Mapoly0199s0006 Marchantia polymorpha HOM05D000769 ORTHO05D000598 5.0e-07 57.8 151 27.2
CiPaw.03G163100 Carya illinoinensis HOM05D000769 ORTHO05D000598 6.6e-07 57.4 46 60.9
AUR62027579 Chenopodium quinoa HOM05D000769 ORTHO05D000598 6.6e-07 57.4 52 53.8
unitig_26.g9928 Utricularia gibba HOM05D006348 ORTHO05D008261 6.6e-07 57.4 52 50.0
BcaC07g42708 Brassica carinata HOM05D000769 ORTHO05D000598 1.1e-06 56.6 106 32.1
Lj1C972T6 Lonicera japonica HOM05D000769 ORTHO05D000598 1.1e-06 56.6 68 41.2
Sp5g00420 Schrenkiella parvula HOM05D000769 ORTHO05D000598 1.1e-06 56.6 102 33.3
AL5G45960 Arabidopsis lyrata HOM05D000769 ORTHO05D000598 3.3e-06 55.1 102 32.4
AT3G63120 Arabidopsis thaliana HOM05D000769 ORTHO05D000598 3.3e-06 55.1 102 32.4
BcaC07g40792 Brassica carinata HOM05D000769 ORTHO05D000598 3.3e-06 55.1 102 31.4
C08p37850 Brassica napus HOM05D000769 ORTHO05D000598 3.3e-06 55.1 102 31.4
HPP92_027152 Vanilla planifolia HOM05D000769 ORTHO05D000598 3.3e-06 55.1 111 36.0
ECA236G3508 Erigeron canadensis HOM05D000769 ORTHO05D000598 4.3e-06 54.7 107 30.8
Peaxi162Scf00641g00815 Petunia axillaris HOM05D000769 ORTHO05D000598 4.3e-06 54.7 104 34.6
Sc21g0001670 Simmondsia chinensis HOM05D003137 ORTHO05D003433 4.3e-06 54.7 45 57.8
Actinidia23631 Actinidia chinensis HOM05D000769 ORTHO05D000598 5.6e-06 54.3 103 33.0
BolC8t51363H Brassica oleracea HOM05D000769 ORTHO05D000598 5.6e-06 54.3 102 31.4
HanXRQChr06g0168921 Helianthus annuus HOM05D000769 ORTHO05D000598 7.3e-06 53.9 107 29.9
QL08p033854 Quercus lobata HOM05D000769 ORTHO05D000598 7.3e-06 53.9 46 58.7
Aa31LG10G16960 Aethionema arabicum HOM05D000769 ORTHO05D000598 9.5e-06 53.5 103 30.1
A09p54940 Brassica napus HOM05D000769 ORTHO05D000598 9.5e-06 53.5 102 31.4
BraA09t40903Z Brassica rapa HOM05D000769 ORTHO05D000598 9.5e-06 53.5 102 31.4


User provided reference genes

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