Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p41530 Brassica napus HOM05D001224 ORTHO05D014499 3.6e-39 164.5 85 100.0
BolC1t04763H Brassica oleracea HOM05D001224 ORTHO05D014499 2.4e-38 161.8 85 97.6
BolC6t35443H Brassica oleracea HOM05D001224 ORTHO05D014499 9.0e-38 159.8 85 96.5
BolC3t20361H Brassica oleracea HOM05D001224 ORTHO05D014499 1.2e-37 159.5 85 96.5
BolC4t25339H Brassica oleracea HOM05D001224 ORTHO05D014499 2.6e-37 158.3 85 96.5
BolC6t36795H Brassica oleracea HOM05D001224 ORTHO05D014499 4.5e-37 157.5 85 95.3
BolC8t49592H Brassica oleracea HOM05D001224 ORTHO05D014499 4.5e-37 157.5 85 96.5
BolC7t41111H Brassica oleracea HOM05D001224 ORTHO05D014499 5.8e-37 157.1 85 94.1
BolC5t31447H Brassica oleracea HOM05D001224 ORTHO05D014499 7.6e-37 156.8 85 96.5
BolC6t36359H Brassica oleracea HOM05D001224 ORTHO05D014499 6.4e-36 153.7 81 96.3
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 3.3e-32 141.4 118 69.5
BcaC04g22673 Brassica carinata HOM05D001224 ORTHO05D001170 5.3e-30 134.0 146 56.8
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 9.0e-30 133.3 146 56.8
BcaC06g36174 Brassica carinata HOM05D001224 ORTHO05D014499 1.2e-29 132.9 137 58.4
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-29 132.5 146 56.2
A07p05860 Brassica napus HOM05D001224 ORTHO05D010571 2.0e-29 132.1 146 56.2
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 3.4e-29 131.3 146 56.2
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-29 130.6 146 56.2
BolC1t04108H Brassica oleracea HOM05D001224 ORTHO05D014499 7.6e-29 130.2 75 90.7
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-28 128.6 146 55.5
C01p45370 Brassica napus HOM05D001224 ORTHO05D001170 2.2e-28 128.6 146 55.5
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 2.9e-28 128.3 146 54.8
BcaC08g43836 Brassica carinata HOM05D001224 ORTHO05D001170 8.4e-28 126.7 142 55.6
C03p58280 Brassica napus HOM05D001224 ORTHO05D001170 1.6e-26 122.5 146 53.4
C04p47850 Brassica napus HOM05D001224 ORTHO05D010571 2.1e-26 122.1 146 52.7
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 2.1e-26 122.1 146 52.7
C05p27340 Brassica napus HOM05D001224 ORTHO05D001170 3.9e-25 117.9 136 53.7
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-22 107.5 53 98.1
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-22 107.5 53 98.1
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-22 107.5 53 98.1
BcaC05g27623 Brassica carinata HOM05D001224 ORTHO05D014499 9.0e-22 106.7 53 96.2
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 9.0e-22 106.7 53 96.2
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 1.2e-21 106.3 53 96.2
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-21 105.5 53 96.2
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-21 105.1 53 94.3
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-21 105.1 53 96.2
BcaC05g28167 Brassica carinata HOM05D001224 ORTHO05D014499 3.4e-21 104.8 53 94.3
C05p42030 Brassica napus HOM05D001224 ORTHO05D001170 3.4e-21 104.8 53 94.3
BraSC37t46118Z Brassica rapa HOM05D001224 ORTHO05D001170 3.4e-21 104.8 53 92.5
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 4.5e-21 104.4 53 96.2
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 4.5e-21 104.4 53 96.2
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-20 102.8 53 94.3
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-20 102.4 53 94.3
BcaC02g11121 Brassica carinata HOM05D001224 ORTHO05D001170 2.2e-20 102.1 52 96.2
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 3.8e-20 101.3 146 47.3
BcaC05g25880 Brassica carinata HOM05D001224 ORTHO05D018692 1.0e-17 93.2 46 95.7
BcaB04g17487 Brassica carinata HOM05D001224 ORTHO05D001170 1.1e-14 83.2 89 49.4
BcaB07g33939 Brassica carinata HOM05D001224 ORTHO05D001170 1.8e-14 82.4 50 72.0
BcaB06g27206 Brassica carinata HOM05D001224 ORTHO05D001170 3.1e-14 81.6 49 75.5
BcaB05g23792 Brassica carinata HOM05D001224 ORTHO05D001170 4.1e-14 81.3 51 70.6
BcaB05g24222 Brassica carinata HOM05D001224 ORTHO05D001170 9.0e-14 80.1 49 73.5
BcaB01g01184 Brassica carinata HOM05D001224 ORTHO05D001170 3.4e-13 78.2 70 54.3
BcaB02g11182 Brassica carinata HOM05D001224 ORTHO05D001170 6.5e-12 73.9 49 63.3
BcaB01g01373 Brassica carinata HOM05D001224 ORTHO05D001170 1.9e-11 72.4 49 63.3
BcaB01g02583 Brassica carinata HOM05D001224 ORTHO05D001170 3.6e-10 68.2 39 74.4
BcaB04g16979 Brassica carinata HOM05D001224 ORTHO05D001170 3.3e-08 61.6 39 66.7
BcaB04g17594 Brassica carinata HOM05D001224 ORTHO05D001170 4.3e-08 61.2 39 66.7
C03p71040 Brassica napus HOM05D001308 ORTHO05D001170 5.7e-08 60.8 72 44.4


User provided reference genes

Program Settings