Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p41020 Brassica napus HOM05D001069 ORTHO05D019503 5.0e-41 170.6 83 100.0
BolC1t04052H Brassica oleracea HOM05D001069 ORTHO05D019503 5.0e-41 170.6 83 100.0
BcaC09g49243 Brassica carinata HOM05D001069 ORTHO05D019503 8.5e-33 143.3 71 98.6
A01p32020 Brassica napus HOM05D001069 ORTHO05D019503 7.2e-32 140.2 71 95.8
BraA01t03327Z Brassica rapa HOM05D001069 ORTHO05D019503 7.2e-32 140.2 71 95.8
BcaB04g20475 Brassica carinata HOM05D001069 ORTHO05D019503 9.7e-21 103.2 54 88.9
C03p52990 Brassica napus HOM05D001069 ORTHO05D001549 6.5e-17 90.5 55 76.4
BolC3t17563H Brassica oleracea HOM05D001069 ORTHO05D001549 6.5e-17 90.5 55 76.4
BcaC01g03393 Brassica carinata HOM05D001069 ORTHO05D001549 8.5e-17 90.1 55 76.4
A03p43140 Brassica napus HOM05D001069 ORTHO05D001549 1.9e-16 89.0 54 77.8
BraA03t13456Z Brassica rapa HOM05D001069 ORTHO05D001549 1.9e-16 89.0 54 77.8
BcaB03g14634 Brassica carinata HOM05D001069 ORTHO05D001549 5.5e-16 87.4 54 75.9
Thhalv10022423m.g Eutrema salsugineum HOM05D001069 ORTHO05D001549 1.2e-13 79.7 54 64.8
AL3G37500 Arabidopsis lyrata HOM05D001069 ORTHO05D001549 2.8e-12 75.1 51 64.7
Aa31LG8G9540 Aethionema arabicum HOM05D001069 ORTHO05D019503 3.7e-12 74.7 50 70.0
AT3G23060 Arabidopsis thaliana HOM05D001069 ORTHO05D001549 6.3e-12 73.9 62 59.7
Sp3g20730 Schrenkiella parvula HOM05D001069 ORTHO05D001549 4.1e-11 71.2 56 60.7
BcaC01g03394 Brassica carinata HOM05D001069 ORTHO05D001549 1.9e-08 62.4 38 71.1
Thecc.04G245200 Theobroma cacao HOM05D001069 ORTHO05D001549 7.2e-08 60.5 51 60.8
Duzib151G0746 Durio zibethinus HOM05D001069 ORTHO05D001549 1.6e-07 59.3 51 58.8
COL.COLO4_15777 Corchorus olitorius HOM05D001069 ORTHO05D001549 2.1e-07 58.9 51 56.9
THA.LOC104822249 Tarenaya hassleriana HOM05D001069 ORTHO05D001549 4.7e-07 57.8 51 56.9
CiPaw.01G192000 Carya illinoinensis HOM05D001069 ORTHO05D001549 3.0e-06 55.1 50 56.0


User provided reference genes

Program Settings