Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p40770 Brassica napus HOM05D023307 ORTHO05D015251 5.5e-101 370.9 183 100.0
A01p31880 Brassica napus HOM05D023307 ORTHO05D015251 8.5e-94 347.1 180 95.6
BcaC09g49260 Brassica carinata HOM05D023307 ORTHO05D015251 4.0e-51 205.3 103 100.0
BraA01t03314Z Brassica rapa HOM05D023307 ORTHO05D015251 5.6e-45 184.9 95 94.7
CARHR099140 Cardamine hirsuta HOM05D001652 ORTHO05D015251 5.6e-29 131.7 162 53.1
AT3G23190 Arabidopsis thaliana HOM05D001652 ORTHO05D015251 1.3e-25 120.6 163 47.9
Carub.0003s2342 Capsella rubella HOM05D001652 ORTHO05D015251 8.4e-25 117.9 165 47.9
THA.LOC104808615 Tarenaya hassleriana HOM05D001652 ORTHO05D015251 8.4e-25 117.9 164 45.1
Thhalv10022215m.g Eutrema salsugineum HOM05D001652 ORTHO05D015251 1.2e-23 114.0 157 45.9
AL3G37820 Arabidopsis lyrata HOM05D001652 ORTHO05D015251 2.1e-23 113.2 163 47.9
BolC1t04035H Brassica oleracea HOM05D023307 ORTHO05D015251 5.6e-21 105.1 61 85.2
Aa31LG8G9690 Aethionema arabicum HOM05D001652 ORTHO05D015251 6.2e-20 101.7 164 42.1
THA.LOC104808614 Tarenaya hassleriana HOM05D001652 ORTHO05D012030 9.4e-08 61.2 123 31.7
BcaC04g21910 Brassica carinata HOM05D001652 ORTHO05D001768 4.6e-07 58.9 121 32.2
C09p25900 Brassica napus HOM05D001652 ORTHO05D001768 4.6e-07 58.9 121 32.2
Ciclev10006114m.g Citrus clementina HOM05D001652 ORTHO05D001768 6.1e-07 58.5 106 34.0
Dinv44663 Davidia involucrata HOM05D001652 ORTHO05D001768 6.1e-07 58.5 106 31.1
Aqoxy5G00259 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 1.0e-06 57.8 107 34.6
BolC9t55496H Brassica oleracea HOM05D001652 ORTHO05D001768 1.0e-06 57.8 121 32.2
CSS0046283 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 1.0e-06 57.8 111 33.3
Rhsim02G0035500 Rhododendron simsii HOM05D001652 ORTHO05D001768 1.0e-06 57.8 107 32.7
AT1G04340 Arabidopsis thaliana HOM05D001652 ORTHO05D001768 1.4e-06 57.4 121 31.4
Hma1.2p1_1716F.1_g299100 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.4e-06 57.4 113 31.9
Hma1.2p1_1716F.1_g299106 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.4e-06 57.4 113 31.9
Actinidia40076 Actinidia chinensis HOM05D001652 ORTHO05D001768 1.8e-06 57.0 106 33.0
Aqoxy2G03619 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 1.8e-06 57.0 120 30.0
RcHm_v2.0_Chr4g0391911 Rosa chinensis HOM05D001652 ORTHO05D001768 2.3e-06 56.6 142 26.8
TWI53G0588 Tripterygium wilfordii HOM05D001652 ORTHO05D001768 2.3e-06 56.6 113 33.6
TAR365G1118 Trochodendron aralioides HOM05D001652 ORTHO05D001768 2.3e-06 56.6 106 32.1
BolC5t29031H Brassica oleracea HOM05D001652 ORTHO05D001768 3.9e-06 55.8 121 30.6
A09p20490 Brassica napus HOM05D001652 ORTHO05D001768 5.1e-06 55.5 121 30.6
BraA09t37655Z Brassica rapa HOM05D001652 ORTHO05D001768 5.1e-06 55.5 121 30.6
Thhalv10008972m.g Eutrema salsugineum HOM05D001652 ORTHO05D001768 5.1e-06 55.5 121 30.6
SGA_v2.0_scaffold88G27267 Striga asiatica HOM05D001652 ORTHO05D001768 5.1e-06 55.5 91 38.5
Aa31LG8G9660 Aethionema arabicum HOM05D001652 ORTHO05D001768 6.7e-06 55.1 93 36.6
BcaB07g31006 Brassica carinata HOM05D001652 ORTHO05D001768 6.7e-06 55.1 121 30.6
BcaC05g24451 Brassica carinata HOM05D001652 ORTHO05D001768 6.7e-06 55.1 110 30.9
C05p02520 Brassica napus HOM05D001652 ORTHO05D001768 6.7e-06 55.1 110 30.9
BraA10t42543Z Brassica rapa HOM05D001652 ORTHO05D001768 6.7e-06 55.1 121 30.6
CSS0020553 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 6.7e-06 55.1 106 32.1
Carub.0008s0513 Capsella rubella HOM05D001652 ORTHO05D001768 6.7e-06 55.1 121 30.6
CiPaw.01G187900 Carya illinoinensis HOM05D001652 ORTHO05D001768 6.7e-06 55.1 106 32.1
Duzib052G1234 Durio zibethinus HOM05D001652 ORTHO05D001768 6.7e-06 55.1 110 30.0
FAN17G1723 Fragaria x ananassa HOM05D001652 ORTHO05D001768 6.7e-06 55.1 141 27.0
GSVIVG01027731001 Vitis vinifera HOM05D001652 ORTHO05D001768 6.7e-06 55.1 120 32.5
BcaC05g24449 Brassica carinata HOM05D001652 ORTHO05D001768 8.8e-06 54.7 121 30.6
Carub.0001s0352 Capsella rubella HOM05D001652 ORTHO05D001768 8.8e-06 54.7 121 29.8
Ciclev10006115m.g Citrus clementina HOM05D001652 ORTHO05D001768 8.8e-06 54.7 106 31.1
FvH4_4g03230 Fragaria vesca HOM05D001652 ORTHO05D001768 8.8e-06 54.7 141 27.0
Manes.03G166800 Manihot esculenta HOM05D001652 ORTHO05D001768 8.8e-06 54.7 108 34.3
Sp3g20840 Schrenkiella parvula HOM05D009905 ORTHO05D012030 8.8e-06 54.7 160 28.1
TWI53G0175 Tripterygium wilfordii HOM05D001652 ORTHO05D001768 8.8e-06 54.7 113 31.0


User provided reference genes

Program Settings