Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p39930 Brassica napus HOM05D001014 ORTHO05D000896 6.0e-97 357.5 173 100.0
BolC1t03948H Brassica oleracea HOM05D001014 ORTHO05D000896 1.4e-42 176.8 93 89.2
C02p47550 Brassica napus HOM05D001014 ORTHO05D000896 4.7e-33 145.2 88 79.5
C09p46240 Brassica napus HOM05D001014 ORTHO05D000896 1.7e-30 136.7 96 70.8
BolC9t57488H Brassica oleracea HOM05D001014 ORTHO05D027777 1.7e-30 136.7 96 70.8
BraA01t03259Z Brassica rapa HOM05D001014 ORTHO05D000896 6.3e-30 134.8 79 79.7
A01p31340 Brassica napus HOM05D001014 ORTHO05D000896 1.8e-29 133.3 79 78.5
BolC1t04802H Brassica oleracea HOM05D001014 ORTHO05D027777 2.2e-27 126.3 92 65.2
BcaC03g16861 Brassica carinata HOM05D001014 ORTHO05D027777 3.8e-27 125.6 77 77.9
A09p21990 Brassica napus HOM05D001014 ORTHO05D027777 6.5e-27 124.8 90 68.9
BraA01t03681Z Brassica rapa HOM05D001014 ORTHO05D000896 1.2e-17 94.0 97 56.7
AL3G31540 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 3.6e-17 92.4 109 50.5
BcaC09g48791 Brassica carinata HOM05D001014 ORTHO05D000896 3.6e-17 92.4 86 59.3
BcaC09g48792 Brassica carinata HOM05D001014 ORTHO05D000896 3.6e-17 92.4 86 59.3
C01p45870 Brassica napus HOM05D001014 ORTHO05D000896 3.6e-17 92.4 86 59.3
Sp3g16430 Schrenkiella parvula HOM05D001014 ORTHO05D000896 4.7e-17 92.0 98 54.1
Thhalv10021480m.g Eutrema salsugineum HOM05D001014 ORTHO05D000896 6.1e-17 91.7 93 54.8
A01p36000 Brassica napus HOM05D001014 ORTHO05D000896 1.0e-16 90.9 97 55.7
AT3G18295 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 1.7e-14 83.6 109 47.7
BcaB04g20776 Brassica carinata HOM05D001014 ORTHO05D000896 4.8e-14 82.0 70 62.9
CARHR093660 Cardamine hirsuta HOM05D001014 ORTHO05D000896 1.4e-13 80.5 105 45.7
Aa31LG8G5160 Aethionema arabicum HOM05D001014 ORTHO05D000896 3.1e-13 79.3 104 45.2
BraA05t21973Z Brassica rapa HOM05D001014 ORTHO05D000896 7.0e-13 78.2 104 49.0
Carub.0001s3792 Capsella rubella HOM05D001014 ORTHO05D000896 4.5e-12 75.5 91 45.1
BolC3t17238H Brassica oleracea HOM05D001683 ORTHO05D001627 1.0e-11 74.3 97 50.5
CARHR038740 Cardamine hirsuta HOM05D001014 ORTHO05D000896 1.7e-11 73.6 94 44.7
BcaC08g43078 Brassica carinata HOM05D001014 ORTHO05D000896 3.8e-11 72.4 76 51.3
C06p03370 Brassica napus HOM05D001014 ORTHO05D000896 3.8e-11 72.4 76 51.3
BolC6t35478H Brassica oleracea HOM05D001683 ORTHO05D001627 3.8e-11 72.4 76 51.3
A05p31350 Brassica napus HOM05D001014 ORTHO05D000896 5.0e-11 72.0 109 46.8
Carub.0003s1808 Capsella rubella HOM05D001014 ORTHO05D000896 5.0e-11 72.0 114 42.1
C05p47650 Brassica napus HOM05D001014 ORTHO05D000896 6.5e-11 71.6 105 45.7
BraA06t23626Z Brassica rapa HOM05D001014 ORTHO05D000896 1.1e-10 70.9 76 52.6
BcaC01g03702 Brassica carinata HOM05D001683 ORTHO05D001627 2.5e-10 69.7 95 48.4
C03p49410 Brassica napus HOM05D001683 ORTHO05D001627 2.5e-10 69.7 95 48.4
BolC5t33473H Brassica oleracea HOM05D001683 ORTHO05D001627 2.5e-10 69.7 112 44.6
A06p04210 Brassica napus HOM05D001014 ORTHO05D000896 5.5e-10 68.6 76 51.3
Aa31LG10G4790 Aethionema arabicum HOM05D001683 ORTHO05D001627 7.2e-10 68.2 95 45.3
BcaB07g33719 Brassica carinata HOM05D001014 ORTHO05D000896 7.2e-10 68.2 76 51.3
A03p40610 Brassica napus HOM05D001683 ORTHO05D001627 7.2e-10 68.2 90 46.7
BraA03t13218Z Brassica rapa HOM05D001014 ORTHO05D000896 7.2e-10 68.2 90 46.7
THA.LOC104820388 Tarenaya hassleriana HOM05D001014 ORTHO05D000896 2.1e-09 66.6 92 46.7
AT1G48770 Arabidopsis thaliana HOM05D001014 ORTHO05D000896 1.8e-08 63.5 99 39.4
C08p04740 Brassica napus HOM05D001014 ORTHO05D000896 1.8e-08 63.5 77 46.8
BolC8t47274H Brassica oleracea HOM05D001014 ORTHO05D000896 1.8e-08 63.5 77 46.8
Sp1g35690 Schrenkiella parvula HOM05D001014 ORTHO05D000896 5.2e-08 62.0 79 46.8
AL1G55490 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 1.5e-07 60.5 90 40.0
BcaC07g37104 Brassica carinata HOM05D001014 ORTHO05D000896 2.0e-07 60.1 77 42.9
A08p04450 Brassica napus HOM05D001014 ORTHO05D000896 4.4e-07 58.9 75 44.0
BcaB08g35194 Brassica carinata HOM05D001014 ORTHO05D092002 1.7e-06 57.0 59 47.5
BraA08t32471Z Brassica rapa HOM05D001014 ORTHO05D000896 2.2e-06 56.6 75 41.3
Lalb_Chr14g0371061 Lupinus albus HOM05D001014 ORTHO05D000896 2.2e-06 56.6 102 32.4
BraA03t11945Z Brassica rapa HOM05D001014 ORTHO05D000896 2.8e-06 56.2 95 43.2
Sed0024398 Sechium edule HOM05D001014 ORTHO05D000896 2.8e-06 56.2 121 30.6
Cpa.g.sc3.489 Carica papaya HOM05D001014 ORTHO05D000896 8.3e-06 54.7 85 40.0


User provided reference genes

Program Settings