Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p39860 Brassica napus HOM05D000162 ORTHO05D003288 5.8e-81 304.7 218 100.0
BolC1t03937H Brassica oleracea HOM05D000162 ORTHO05D003288 1.1e-31 141.0 171 52.0
A09p64860 Brassica napus HOM05D000162 ORTHO05D003288 9.7e-28 127.9 84 76.2
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 1.1e-26 124.4 84 75.0
BolC8t52230H Brassica oleracea HOM05D000162 ORTHO05D003288 1.1e-26 124.4 82 76.8
BcaC04g19405 Brassica carinata HOM05D000162 ORTHO05D003288 2.5e-23 113.2 72 77.8
C09p56060 Brassica napus HOM05D000162 ORTHO05D003288 2.5e-23 113.2 72 77.8
BolC9t58473H Brassica oleracea HOM05D000162 ORTHO05D003288 4.2e-23 112.5 72 77.8
AL1G23620 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.6e-22 110.5 72 76.4
C08p47400 Brassica napus HOM05D000162 ORTHO05D003288 1.6e-22 110.5 70 77.1
BcaC04g20649 Brassica carinata HOM05D000162 ORTHO05D003288 2.7e-22 109.8 72 77.8
BolC9t56985H Brassica oleracea HOM05D000162 ORTHO05D003288 2.7e-22 109.8 72 77.8
BraA09t41752Z Brassica rapa HOM05D001827 ORTHO05D001790 2.7e-22 109.8 72 76.4
C09p41050 Brassica napus HOM05D000162 ORTHO05D003288 4.7e-22 109.0 72 76.4
BraA09t41588Z Brassica rapa HOM05D003784 ORTHO05D004345 4.7e-22 109.0 72 76.4
A09p64060 Brassica napus HOM05D001827 ORTHO05D001790 7.9e-22 108.2 72 75.0
A10p09540 Brassica napus HOM05D000162 ORTHO05D000090 1.0e-21 107.8 72 76.4
BraA10t43029Z Brassica rapa HOM05D000162 ORTHO05D000090 1.0e-21 107.8 72 76.4
BolC8t49183H Brassica oleracea HOM05D000162 ORTHO05D000090 2.6e-20 103.2 77 68.8
BraA09t41809Z Brassica rapa HOM05D000162 ORTHO05D003288 7.4e-20 101.7 66 78.8
BolC1t04080H Brassica oleracea HOM05D000162 ORTHO05D003288 2.2e-19 100.1 66 77.3
BolC5t33057H Brassica oleracea HOM05D000162 ORTHO05D003288 2.8e-19 99.8 68 75.0
C08p15550 Brassica napus HOM05D000162 ORTHO05D000090 4.8e-19 99.0 77 67.5
Carub.0001s1249 Capsella rubella HOM05D000162 ORTHO05D000090 1.4e-18 97.4 72 69.4
Carub.0002s0787 Capsella rubella HOM05D000162 ORTHO05D003288 1.8e-18 97.1 72 72.2
AL2G12790 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 5.3e-18 95.5 72 69.4
BcaB08g34329 Brassica carinata HOM05D000162 ORTHO05D000090 9.1e-18 94.7 63 76.2
BcaB08g34255 Brassica carinata HOM05D000162 ORTHO05D003288 2.2e-16 90.1 54 85.2
A09p13890 Brassica napus HOM05D000162 ORTHO05D003288 1.1e-15 87.8 72 66.7
AT1G63150 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.5e-15 87.4 72 66.7
C08p15620 Brassica napus HOM05D000032 ORTHO05D007907 1.5e-15 87.4 62 71.0
AL1G24380 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.9e-15 87.0 72 62.5
CARHR055290 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.9e-15 87.0 70 65.7
CARHR048090 Cardamine hirsuta HOM05D000162 ORTHO05D003288 2.5e-15 86.7 71 64.8
Thhalv10015983m.g Eutrema salsugineum HOM05D000162 ORTHO05D003288 2.5e-15 86.7 71 67.6
BcaC05g28279 Brassica carinata HOM05D000162 ORTHO05D003288 3.2e-15 86.3 72 65.3
C05p43270 Brassica napus HOM05D000162 ORTHO05D003288 3.2e-15 86.3 72 65.3
CARHR048540 Cardamine hirsuta HOM05D000162 ORTHO05D003288 7.2e-15 85.1 70 64.3
C05p38870 Brassica napus HOM05D000162 ORTHO05D003288 2.1e-14 83.6 70 65.7
BcaC07g41621 Brassica carinata HOM05D000162 ORTHO05D000090 2.7e-14 83.2 46 89.1
BcaC07g41681 Brassica carinata HOM05D000162 ORTHO05D000090 3.6e-14 82.8 51 84.3
C08p47120 Brassica napus HOM05D000162 ORTHO05D000090 3.6e-14 82.8 51 84.3
BolC8t52251H Brassica oleracea HOM05D000162 ORTHO05D000090 3.6e-14 82.8 51 84.3
BraA08t35189Z Brassica rapa HOM05D000032 ORTHO05D007907 4.7e-14 82.4 54 79.6
BolC9t54565H Brassica oleracea HOM05D000162 ORTHO05D003288 6.1e-14 82.0 72 63.9
C08p46250 Brassica napus HOM05D000162 ORTHO05D000090 2.3e-13 80.1 50 80.0
BolC8t52174H Brassica oleracea HOM05D000162 ORTHO05D000090 2.3e-13 80.1 50 80.0
C04p29110 Brassica napus HOM05D000162 ORTHO05D003288 3.0e-13 79.7 71 60.6
BraA08t35195Z Brassica rapa HOM05D000162 ORTHO05D000090 8.8e-13 78.2 53 77.4
BcaB03g13176 Brassica carinata HOM05D000162 ORTHO05D000090 1.2e-12 77.8 53 77.4
C08p15560 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-12 77.8 55 74.5
BolC8t49184H Brassica oleracea HOM05D000162 ORTHO05D000090 1.2e-12 77.8 55 74.5
Carub.0001s1230 Capsella rubella HOM05D000162 ORTHO05D000090 1.2e-12 77.8 47 80.9
A09p13590 Brassica napus HOM05D000162 ORTHO05D003288 1.5e-12 77.4 66 62.1
BolC3t21476H Brassica oleracea HOM05D000162 ORTHO05D003288 1.5e-12 77.4 69 60.9
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 9.7e-12 74.7 40 92.5
BraA09t41633Z Brassica rapa HOM05D000162 ORTHO05D003288 9.7e-12 74.7 40 92.5
AT1G62590 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.1e-10 71.2 54 72.2
CARHR051050 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.1e-10 71.2 54 70.4
Thhalv10020312m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.4e-10 70.9 52 71.2
AL2G12380 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 1.8e-10 70.5 53 69.8
Carub.0002s0148 Capsella rubella HOM05D000162 ORTHO05D003288 2.4e-10 70.1 53 69.8
Carub.0002s0190 Capsella rubella HOM05D000162 ORTHO05D003288 2.4e-10 70.1 53 71.7
CARHR051150 Cardamine hirsuta HOM05D000162 ORTHO05D003288 2.4e-10 70.1 53 67.9
AL2G18840 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 3.1e-10 69.7 54 68.5
AT1G63330 Arabidopsis thaliana HOM05D000162 ORTHO05D003288 3.1e-10 69.7 53 71.7
Thhalv10002441m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 7.0e-10 68.6 42 83.3
Carub.0001s1231 Capsella rubella HOM05D000162 ORTHO05D000090 9.1e-10 68.2 51 68.6
BraA09t37036Z Brassica rapa HOM05D000162 ORTHO05D003288 1.2e-09 67.8 52 71.2
CARHR048780 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.2e-09 67.8 53 66.0
Thhalv10023344m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.2e-09 67.8 54 64.8
C09p16260 Brassica napus HOM05D000162 ORTHO05D003288 2.0e-09 67.0 53 69.8
BolC9t54536H Brassica oleracea HOM05D000162 ORTHO05D003288 2.0e-09 67.0 53 69.8
AL3G36780 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 4.5e-09 65.9 47 72.3
BcaB03g11740 Brassica carinata HOM05D000162 ORTHO05D003288 4.5e-09 65.9 59 57.6
BcaC07g41727 Brassica carinata HOM05D000162 ORTHO05D000090 4.5e-09 65.9 37 83.8
BraA09t41634Z Brassica rapa HOM05D000162 ORTHO05D000090 5.9e-09 65.5 36 91.7
Carub.0002s0192 Capsella rubella HOM05D000162 ORTHO05D003288 5.9e-09 65.5 53 69.8
CARHR046830 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.9e-09 65.5 119 38.7
CARHR048080 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.9e-09 65.5 54 66.7
CARHR048470 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.3e-08 64.3 49 69.4
FAN21G0792 Fragaria x ananassa HOM05D000027 ORTHO05D001163 1.3e-08 64.3 69 46.4
FAN21G0960 Fragaria x ananassa HOM05D000027 ORTHO05D001163 1.3e-08 64.3 69 46.4
Sp2g01710 Schrenkiella parvula HOM05D000162 ORTHO05D003288 1.7e-08 63.9 85 48.2
Carub.0002s0209 Capsella rubella HOM05D000162 ORTHO05D003288 3.8e-08 62.8 53 64.2
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 5.0e-08 62.4 82 41.5
THA.LOC104814143 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 5.0e-08 62.4 52 61.5
EL10Ac4g09814 Beta vulgaris HOM05D000162 ORTHO05D000090 6.5e-08 62.0 80 45.0
BolC8t49189H Brassica oleracea HOM05D000032 ORTHO05D007907 6.5e-08 62.0 72 50.0
AL2G12830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 8.5e-08 61.6 45 68.9
CARHR012890 Cardamine hirsuta HOM05D000162 ORTHO05D003288 8.5e-08 61.6 44 65.9
Thhalv10007258m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 8.5e-08 61.6 40 77.5
Thhalv10023987m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.1e-07 61.2 42 73.8
BcaB08g34250 Brassica carinata HOM05D000162 ORTHO05D003288 1.5e-07 60.8 36 80.6
A09p63660 Brassica napus HOM05D000162 ORTHO05D000090 3.2e-07 59.7 36 77.8
Thhalv10023354m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 3.2e-07 59.7 45 66.7
Thhalv10023976m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.2e-07 59.3 42 71.4
Thhalv10023350m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 5.5e-07 58.9 41 73.2
THA.LOC104803570 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 5.5e-07 58.9 39 69.2
Thhalv10023351m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 7.2e-07 58.5 45 66.7
BcaB08g34253 Brassica carinata HOM05D000162 ORTHO05D000090 1.2e-06 57.8 32 84.4
BcaC07g41685 Brassica carinata HOM05D000162 ORTHO05D000090 1.2e-06 57.8 31 90.3
A09p63670 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-06 57.8 31 90.3
C08p47160 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-06 57.8 31 90.3
BolC8t52255H Brassica oleracea HOM05D000162 ORTHO05D000090 1.2e-06 57.8 31 90.3
BraA09t41715Z Brassica rapa HOM05D000162 ORTHO05D000090 1.2e-06 57.8 31 90.3
AL1G24180 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.6e-06 57.4 32 87.5
BcaB08g37453 Brassica carinata HOM05D000162 ORTHO05D003288 1.6e-06 57.4 36 75.0
FAN21G2825 Fragaria x ananassa HOM05D000162 ORTHO05D003288 1.6e-06 57.4 69 40.6
BcaC07g41684 Brassica carinata HOM05D000162 ORTHO05D000090 2.1e-06 57.0 31 87.1
C08p47150 Brassica napus HOM05D000162 ORTHO05D000090 2.1e-06 57.0 31 87.1
BolC8t52254H Brassica oleracea HOM05D000162 ORTHO05D000090 2.1e-06 57.0 31 87.1
THA.LOC109115971 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.6e-06 56.2 39 69.2
AT1G12700 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 6.1e-06 55.5 31 83.9
C08p33690 Brassica napus HOM05D000162 ORTHO05D003288 6.1e-06 55.5 37 75.7
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 6.1e-06 55.5 31 83.9
BolC8t52131H Brassica oleracea HOM05D003784 ORTHO05D004345 6.1e-06 55.5 31 83.9
THA.LOC104806534 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 6.1e-06 55.5 32 75.0
A09p63470 Brassica napus HOM05D000162 ORTHO05D000090 8.0e-06 55.1 36 77.8
C08p47410 Brassica napus HOM05D000274 ORTHO05D006767 8.0e-06 55.1 63 63.5
BraA09t41697Z Brassica rapa HOM05D000162 ORTHO05D000090 8.0e-06 55.1 36 77.8


User provided reference genes

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