Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p39400 Brassica napus HOM05D060922 ORTHO05D042004 1.3e-110 402.9 187 100.0
BolC1t03888H Brassica oleracea HOM05D060922 ORTHO05D042004 1.3e-110 402.9 187 100.0
BcaB08g34452 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-13 79.7 98 42.9
Thhalv10027471m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.4e-13 79.0 70 51.4
Sp7g11920 Schrenkiella parvula HOM05D000209 ORTHO05D000129 4.4e-13 79.0 127 34.6
BcaC01g03226 Brassica carinata HOM05D000209 ORTHO05D000129 5.8e-13 78.6 98 43.9
A03p44180 Brassica napus HOM05D000209 ORTHO05D000129 5.8e-13 78.6 100 42.0
C03p54560 Brassica napus HOM05D000209 ORTHO05D000129 5.8e-13 78.6 98 43.9
BolC3t17743H Brassica oleracea HOM05D000209 ORTHO05D000129 5.8e-13 78.6 98 43.9
AL3G41350 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-12 76.3 99 43.4
Carub.0004s0842 Capsella rubella HOM05D000209 ORTHO05D000129 2.9e-12 76.3 121 39.7
CARHR248580 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.9e-12 76.3 103 40.8
CARHR120290 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.7e-12 75.9 125 35.2
CARHR120300 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.7e-12 75.9 138 33.3
BraA03t13547Z Brassica rapa HOM05D000209 ORTHO05D000129 4.9e-12 75.5 100 41.0
A05p30170 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-12 74.7 104 38.5
AL3G41340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-11 73.9 98 44.9
A02p24150 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-11 73.9 128 35.2
AL4G22640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-11 73.6 117 38.5
Carub.0004s0838 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-11 73.6 117 36.8
AL4G22680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.2e-11 72.8 117 39.3
Carub.0004s0843 Capsella rubella HOM05D000209 ORTHO05D000129 4.1e-11 72.4 117 37.6
Thhalv10005679m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.4e-11 72.0 123 36.6
Carub.0004s0845 Capsella rubella HOM05D000209 ORTHO05D000129 7.1e-11 71.6 119 40.3
BcaC09g48583 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-11 71.2 101 38.6
AL3G41330 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-10 70.5 100 43.0
Carub.0003s1724 Capsella rubella HOM05D000209 ORTHO05D000129 1.6e-10 70.5 120 32.5
BolC1t04433H Brassica oleracea HOM05D000209 ORTHO05D000129 2.7e-10 69.7 127 33.9
Carub.0004s0386 Capsella rubella HOM05D000209 ORTHO05D000129 2.7e-10 69.7 121 38.8
AL8G10750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.5e-10 69.3 121 37.2
BraA07t28593Z Brassica rapa HOM05D000209 ORTHO05D000129 3.5e-10 69.3 155 33.5
Thhalv10002977m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-10 69.3 107 37.4
BcaB01g05758 Brassica carinata HOM05D000209 ORTHO05D000129 4.6e-10 68.9 139 30.9
Carub.0006s3223 Capsella rubella HOM05D000209 ORTHO05D000129 4.6e-10 68.9 109 39.4
AL4G22690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.0e-10 68.6 117 36.8
Carub.0003s1874 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-09 67.8 115 35.7
CARHR092860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.0e-09 67.8 124 36.3
AL3G41320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-09 67.4 98 42.9
AT3G21120 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.3e-09 67.4 120 33.3
BcaC01g05771 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-09 67.4 129 31.0
BolC3t14637H Brassica oleracea HOM05D000209 ORTHO05D000129 1.3e-09 67.4 129 31.0
BraA05t21857Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-09 67.4 110 35.5
Carub.0004s0385 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-09 67.4 127 36.2
Thhalv10022074m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-09 67.4 99 36.4
AT3G25460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-09 67.0 94 42.6
BcaC06g35672 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-09 67.0 155 32.9
C07p12230 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-09 67.0 155 32.9
CARHR151680 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-09 67.0 79 48.1
AT3G49980 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-09 66.2 115 35.7
AT5G47300 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-09 66.2 112 35.7
A07p08080 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-09 66.2 105 40.0
AT3G17540 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.9e-09 65.9 61 49.2
BcaC09g48900 Brassica carinata HOM05D000209 ORTHO05D000129 5.1e-09 65.5 77 41.6
Carub.0002s0522 Capsella rubella HOM05D000209 ORTHO05D000129 5.1e-09 65.5 75 40.0
BcaNung01175 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-09 65.1 68 47.1
AL5G24180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.6e-09 64.7 100 38.0
AT3G21130 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-08 63.9 102 34.3
Thhalv10002795m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-08 63.9 107 34.6
CARHR084920 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.9e-08 63.5 100 36.0
Thhalv10022189m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-08 63.5 65 47.7
C03p81480 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-08 63.2 141 31.2
BolC3t20419H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-08 63.2 141 31.2
BcaC05g27969 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-08 62.8 73 43.8
BcaC05g27971 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-08 62.8 73 43.8
C05p39770 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-08 62.8 73 43.8
BolC5t32720H Brassica oleracea HOM05D000209 ORTHO05D000129 3.3e-08 62.8 73 43.8
BraA05t21838Z Brassica rapa HOM05D000209 ORTHO05D000129 3.3e-08 62.8 73 43.8
AL3G22030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-08 62.4 118 35.6
AL3G29750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.3e-08 62.4 105 36.2
BolC7t41690H Brassica oleracea HOM05D000209 ORTHO05D000129 5.6e-08 62.0 105 38.1
BraA01t03792Z Brassica rapa HOM05D000209 ORTHO05D000129 7.3e-08 61.6 128 29.7
Thhalv10022281m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.3e-08 61.6 104 35.6
AT3G16740 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.6e-08 61.2 120 35.0
A01p06000 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-08 61.2 122 36.9
A05p18310 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-08 61.2 66 45.5
C05p45160 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-08 61.2 64 48.4
BolC1t04790H Brassica oleracea HOM05D000209 ORTHO05D000129 9.6e-08 61.2 124 28.2
BraA01t00565Z Brassica rapa HOM05D000209 ORTHO05D000129 9.6e-08 61.2 122 36.9
BraA05t20724Z Brassica rapa HOM05D000209 ORTHO05D000129 9.6e-08 61.2 66 45.5
AL3G29670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-07 60.8 121 32.2
BcaB04g17085 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-07 60.8 95 35.8
BraA01t04240Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-07 60.8 105 35.2
BraA08t32214Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-07 60.8 116 34.5
Thhalv10021981m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.2e-07 60.8 97 35.1
Sp3g19130 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.2e-07 60.8 73 41.1
Thhalv10003000m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.6e-07 60.5 138 28.3
BcaB04g19147 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-07 60.1 96 36.5
CARHR108200 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-07 60.1 103 36.9
AL3G30850 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.8e-07 59.7 112 32.1
AT3G17320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.8e-07 59.7 51 52.9
BcaC09g51475 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-07 59.7 97 32.0
C01p12770 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-07 59.7 97 32.0
BolC1t01254H Brassica oleracea HOM05D000209 ORTHO05D000129 2.8e-07 59.7 97 32.0
Thhalv10003403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.8e-07 59.7 125 34.4
BcaB02g10954 Brassica carinata HOM05D000209 ORTHO05D000129 3.6e-07 59.3 68 47.1
A01p41660 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-07 59.3 105 35.2
C01p48270 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-07 59.3 124 28.2
BolC6t35985H Brassica oleracea HOM05D000209 ORTHO05D000129 3.6e-07 59.3 116 32.8
Carub.0005s1634 Capsella rubella HOM05D000209 ORTHO05D000129 3.6e-07 59.3 114 34.2
BcaC09g51845 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-07 58.9 122 36.1
A01p31970 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-07 58.9 49 51.0
C01p08400 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-07 58.9 122 36.1
C03p51510 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-07 58.9 96 36.5
BolC1t00823H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-07 58.9 122 36.1
BolC1t00827H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-07 58.9 122 36.1
BraA01t03323Z Brassica rapa HOM05D000209 ORTHO05D000129 4.7e-07 58.9 49 51.0
AL3G35150 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.2e-07 58.5 52 51.9
BcaB06g26443 Brassica carinata HOM05D000209 ORTHO05D000129 6.2e-07 58.5 49 51.0
BcaC02g07401 Brassica carinata HOM05D000209 ORTHO05D000129 6.2e-07 58.5 118 32.2
A08p01610 Brassica napus HOM05D000209 ORTHO05D000129 6.2e-07 58.5 73 41.1
Thhalv10022140m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.2e-07 58.5 53 50.9
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.1e-07 58.2 113 31.9
A01p10800 Brassica napus HOM05D000209 ORTHO05D000129 8.1e-07 58.2 127 30.7
CARHR266870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.1e-07 58.2 95 38.9
Thhalv10022425m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.1e-07 58.2 50 54.0
Thhalv10027248m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.1e-07 58.2 127 32.3
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-06 57.8 86 43.0
AL4G22750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-06 57.8 90 34.4
BcaC09g49247 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-06 57.8 49 49.0
A01p31960 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-06 57.8 49 49.0
C01p12780 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-06 57.8 117 30.8
BolC1t01255H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-06 57.8 117 30.8
BolC4t21828H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-06 57.8 69 40.6
BraA01t03322Z Brassica rapa HOM05D000209 ORTHO05D000129 1.1e-06 57.8 49 49.0
Thhalv10022401m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-06 57.8 97 37.1
AL3G30330 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 128 30.5
AL3G31590 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 97 36.1
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 120 34.2
AL439U10014 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 137 32.8
BcaC01g01386 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 72 40.3
BcaC01g03382 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 102 33.3
C03p48830 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 57.4 96 37.5
C03p91460 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 57.4 72 40.3
BolC3t21464H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 57.4 72 40.3
BolC4t21813H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 57.4 69 40.6
Carub.0003s1760 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-06 57.4 113 31.9
CARHR159080 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-06 57.4 126 34.9
BcaC01g03521 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-06 57.0 95 36.8
Carub.0003s2111 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-06 57.0 169 30.2
BcaC08g44085 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 65 44.6
BcaNung02983 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 132 34.1
A01p10790 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 97 30.9
A01p38090 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 127 29.9
C03p53100 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 102 33.3
BolC3t17575H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-06 56.6 102 33.3
BraA01t01025Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-06 56.6 97 30.9
Carub.0006s3222 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-06 56.6 113 37.2
Thhalv10021906m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.4e-06 56.6 60 46.7
AL3G31600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 150 30.0
AT4G09870 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-06 56.2 175 28.0
BcaB02g06977 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 154 28.6
BcaB02g06982 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 154 28.6
BcaC02g12696 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 60 46.7
BcaC08g44082 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 113 33.6
C04p01610 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-06 56.2 69 39.1
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.0e-06 55.8 67 41.8
AL5G29320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.0e-06 55.8 127 29.1
BcaC05g28848 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-06 55.8 108 33.3
C07p41000 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-06 55.8 118 31.4
BolC7t44630H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-06 55.8 118 31.4
Thhalv10017624m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.0e-06 55.8 128 32.8
AL2G13920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 55.5 101 30.7
AL3G32310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 55.5 172 23.3
AL3G35160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-06 55.5 51 49.0
AT3G24700 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.2e-06 55.5 129 31.8
BolC1t05064H Brassica oleracea HOM05D000209 ORTHO05D000129 5.2e-06 55.5 65 43.1
BraA10t43735Z Brassica rapa HOM05D000209 ORTHO05D000129 5.2e-06 55.5 118 32.2
CARHR092590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.2e-06 55.5 83 33.7
CARHR135370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.2e-06 55.5 86 34.9
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.8e-06 55.1 60 46.7
BolC4t21842H Brassica oleracea HOM05D000209 ORTHO05D000129 6.8e-06 55.1 69 42.0
BolC6t38624H Brassica oleracea HOM05D000209 ORTHO05D000129 6.8e-06 55.1 65 44.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 6.8e-06 55.1 63 42.9
BraA04t18465Z Brassica rapa HOM05D000209 ORTHO05D000129 6.8e-06 55.1 105 35.2
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-06 55.1 82 34.1
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-06 55.1 73 39.7
Thhalv10022288m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.8e-06 55.1 124 30.6
Sp3g21250 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.8e-06 55.1 101 34.7
AL4G15010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.9e-06 54.7 114 32.5
BcaB06g26469 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-06 54.7 70 37.1
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 8.9e-06 54.7 91 36.3
C03p50730 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-06 54.7 96 42.7
BolC3t17361H Brassica oleracea HOM05D000209 ORTHO05D000129 8.9e-06 54.7 96 42.7
Carub.0003s2112 Capsella rubella HOM05D000209 ORTHO05D000129 8.9e-06 54.7 79 40.5
Thhalv10022064m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.9e-06 54.7 130 29.2
Thhalv10023848m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.9e-06 54.7 56 53.6
Thhalv10027055m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.9e-06 54.7 158 32.3


User provided reference genes

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