Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p39220 Brassica napus HOM05D028032 ORTHO05D033519 2.1e-64 248.8 123 100.0
BolC1t03871H Brassica oleracea HOM05D028032 ORTHO05D033519 1.8e-63 245.7 123 99.2
BraA01t03213Z Brassica rapa HOM05D028032 ORTHO05D033519 1.2e-62 243.0 123 97.6
A01p30860 Brassica napus HOM05D028032 ORTHO05D098564 6.2e-32 141.0 94 80.9
Sp2g02580 Schrenkiella parvula HOM05D000161 ORTHO05D000111 6.7e-10 67.8 52 71.2
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.6e-09 65.9 144 35.4
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 3.3e-09 65.5 50 68.0
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 1.3e-08 63.5 45 73.3
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 1.7e-08 63.2 52 61.5
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 1.7e-08 63.2 52 61.5
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 6.3e-08 61.2 52 61.5
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-07 60.5 50 64.0
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 1.4e-07 60.1 53 69.8
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 1.4e-07 60.1 53 69.8
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 1.4e-07 60.1 53 69.8
C04p28840 Brassica napus HOM05D000161 ORTHO05D000111 1.8e-07 59.7 121 35.5
Carub.0002s0294 Capsella rubella HOM05D000161 ORTHO05D000111 1.8e-07 59.7 52 57.7
AT1G62010 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.4e-07 59.3 52 61.5
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-07 59.3 50 68.0
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.4e-07 59.3 52 59.6
BcaC02g10446 Brassica carinata HOM05D000161 ORTHO05D000111 3.1e-07 58.9 45 66.7
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.1e-07 58.5 45 66.7
AL2G21920 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.0e-07 57.8 52 59.6
AL2G14060 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 9.1e-07 57.4 55 60.0
Thhalv10023911m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.1e-07 57.4 53 62.3
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.2e-06 57.0 53 58.5
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-06 57.0 53 58.5
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.5e-06 56.6 45 57.8
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.5e-06 56.6 53 62.3
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 2.0e-06 56.2 45 64.4
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 2.0e-06 56.2 45 64.4
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 2.0e-06 56.2 50 62.0
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.0e-06 56.2 52 59.6
AT1G56380 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.6e-06 55.8 52 57.7
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 2.6e-06 55.8 50 62.0
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 2.6e-06 55.8 52 61.5
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 2.6e-06 55.8 52 61.5
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 2.6e-06 55.8 50 62.0
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 2.6e-06 55.8 50 62.0
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.6e-06 55.8 45 60.0
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.6e-06 55.8 45 62.2
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 3.4e-06 55.5 45 64.4
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.4e-06 55.5 45 62.2
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.4e-06 55.5 53 58.5
Sp2g02610 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.4e-06 55.5 52 55.8
AL2G13950 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.5e-06 55.1 53 58.5
AL5G44270 Arabidopsis lyrata HOM05D000144 ORTHO05D000111 4.5e-06 55.1 51 56.9
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 4.5e-06 55.1 45 62.2
C04p28070 Brassica napus HOM05D047572 ORTHO05D041082 4.5e-06 55.1 62 53.2
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 4.5e-06 55.1 45 62.2
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 4.5e-06 55.1 55 56.4
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.5e-06 55.1 50 62.0
Thhalv10024076m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.5e-06 55.1 45 62.2
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.9e-06 54.7 52 59.6
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.9e-06 54.7 48 62.5
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 5.9e-06 54.7 53 62.3
AL2G14110 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.7e-06 54.3 55 61.8
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 7.7e-06 54.3 55 56.4


User provided reference genes

Program Settings