Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.5e-69 266.2 141 100.0
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 3.3e-69 265.0 141 99.3
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 3.3e-69 265.0 141 99.3
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 1.6e-68 262.7 141 98.6
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 1.6e-68 262.7 141 98.6
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 1.4e-67 259.6 141 97.9
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 1.5e-66 256.1 141 95.7
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 5.8e-66 254.2 147 93.9
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 5.1e-54 214.5 118 98.3
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 1.5e-53 213.0 121 95.9
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 2.8e-52 208.8 141 82.3
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 1.4e-51 206.5 114 96.5
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 3.8e-33 145.2 131 66.4
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 1.9e-32 142.9 131 65.6
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 1.9e-32 142.9 131 65.6
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 2.5e-32 142.5 101 77.2
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 3.2e-32 142.1 131 65.6
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 1.6e-31 139.8 133 66.2
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 8.7e-30 134.0 131 61.8
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 8.7e-30 134.0 131 61.8
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 8.7e-30 134.0 131 61.8
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 8.7e-30 134.0 131 61.8
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 8.7e-30 134.0 131 62.6
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 3.3e-29 132.1 131 61.1
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 9.7e-29 130.6 130 61.5
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 1.6e-28 129.8 131 61.1
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 6.9e-27 124.4 131 60.3
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 9.1e-27 124.0 128 61.7
C06p14100 Brassica napus HOM05D004269 ORTHO05D013520 1.2e-26 123.6 67 97.0
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 1.2e-26 123.6 132 57.6
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 3.2e-24 115.5 131 55.7
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 5.1e-22 108.2 131 51.1
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 1.5e-21 106.7 67 82.1
BcaC07g37609 Brassica carinata HOM05D004269 ORTHO05D013520 2.4e-19 99.4 79 69.6
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 6.5e-17 91.3 133 45.9
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 1.9e-16 89.7 129 48.1
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 1.2e-15 87.0 134 46.3
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 4.7e-15 85.1 111 49.5
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 7.9e-15 84.3 70 71.4
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.4e-14 83.6 133 45.9
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 3.9e-14 82.0 104 49.0
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 1.1e-13 80.5 104 49.0
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 1.1e-13 80.5 120 48.3
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 2.6e-13 79.3 110 46.4
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 2.6e-13 79.3 119 44.5
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 3.3e-13 79.0 126 44.4
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 3.3e-13 79.0 64 67.2
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 5.7e-13 78.2 124 44.4
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 5.7e-13 78.2 104 48.1
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 5.7e-13 78.2 119 43.7
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 5.7e-13 78.2 148 39.2
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 7.4e-13 77.8 131 42.0
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 7.4e-13 77.8 64 65.6
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 9.7e-13 77.4 133 45.1
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 1.3e-12 77.0 132 43.2
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 1.3e-12 77.0 64 65.6
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.7e-12 76.6 109 45.0
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 1.7e-12 76.6 134 41.8
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 1.7e-12 76.6 128 42.2
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 1.7e-12 76.6 64 65.6
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 2.2e-12 76.3 126 41.3
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 2.2e-12 76.3 132 43.9
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 2.2e-12 76.3 131 41.2
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 2.8e-12 75.9 106 48.1
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 2.8e-12 75.9 126 42.1
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 4.8e-12 75.1 64 60.9
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 4.8e-12 75.1 142 45.1
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 4.8e-12 75.1 107 46.7
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 4.8e-12 75.1 131 41.2
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 6.3e-12 74.7 138 41.3
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 6.3e-12 74.7 133 42.1
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 6.3e-12 74.7 111 47.7
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 1.4e-11 73.6 130 42.3
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 1.4e-11 73.6 64 64.1
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 1.4e-11 73.6 64 60.9
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 1.4e-11 73.6 142 45.1
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 1.8e-11 73.2 64 60.9
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 1.8e-11 73.2 64 62.5
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 1.8e-11 73.2 131 42.0
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 2.4e-11 72.8 105 46.7
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 2.4e-11 72.8 128 41.4
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 2.4e-11 72.8 128 41.4
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.4e-11 72.8 64 60.9
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.4e-11 72.8 64 60.9
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 3.1e-11 72.4 118 45.8
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 3.1e-11 72.4 118 45.8
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 62.5
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 3.1e-11 72.4 64 64.1
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 3.1e-11 72.4 130 42.3
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 59.4
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 59.4
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 59.4
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 60.9
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 4.1e-11 72.0 64 59.4
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 5.3e-11 71.6 64 60.9
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 5.3e-11 71.6 108 48.1
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 5.3e-11 71.6 61 62.3
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 7.0e-11 71.2 72 58.3
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 7.0e-11 71.2 64 60.9
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 7.0e-11 71.2 127 44.9
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 7.0e-11 71.2 122 41.8
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 7.0e-11 71.2 130 41.5
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 9.1e-11 70.9 133 39.8
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 9.1e-11 70.9 64 59.4
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 9.1e-11 70.9 64 60.9
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 9.1e-11 70.9 58 67.2
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.2e-10 70.5 64 59.4
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.2e-10 70.5 128 39.8
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.2e-10 70.5 64 60.9
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 1.6e-10 70.1 64 59.4
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 1.6e-10 70.1 130 39.2
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.6e-10 70.1 64 59.4
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 1.6e-10 70.1 109 43.1
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 2.0e-10 69.7 64 60.9
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 2.0e-10 69.7 64 57.8
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 2.6e-10 69.3 59 67.8
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 2.6e-10 69.3 129 41.1
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 2.6e-10 69.3 64 59.4
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 2.6e-10 69.3 64 59.4
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 3.5e-10 68.9 127 38.6
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 3.5e-10 68.9 64 59.4
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 4.5e-10 68.6 64 59.4
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 7.7e-10 67.8 69 56.5
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 3.8e-09 65.5 64 56.2
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 3.8e-09 65.5 61 59.0
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 6.5e-09 64.7 64 54.7
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 8.5e-09 64.3 46 71.7
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 3.2e-08 62.4 64 51.6
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 5.5e-08 61.6 77 50.6
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 1.6e-07 60.1 64 53.1
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 8.0e-07 57.8 64 51.6
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 8.8e-06 54.3 79 45.6


User provided reference genes

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