Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p38250 Brassica napus HOM05D007484 ORTHO05D008290 4.2e-195 684.5 342 100.0
BolC1t03787H Brassica oleracea HOM05D007484 ORTHO05D008290 4.7e-170 601.3 453 72.6
BraA01t03152Z Brassica rapa HOM05D007484 ORTHO05D008290 6.6e-164 580.9 453 70.2
BolC1t03792H Brassica oleracea HOM05D007484 ORTHO05D008290 5.6e-163 577.8 453 70.0
C06p16440 Brassica napus HOM05D007484 ORTHO05D008290 1.8e-161 572.8 453 70.2
BolC6t36847H Brassica oleracea HOM05D007484 ORTHO05D008290 1.8e-161 572.8 453 70.2
C01p38280 Brassica napus HOM05D007484 ORTHO05D008290 1.2e-160 570.1 453 69.1
A01p30140 Brassica napus HOM05D007484 ORTHO05D008290 8.3e-159 563.9 453 68.7
BcaC08g44240 Brassica carinata HOM05D007484 ORTHO05D008290 9.5e-155 550.4 453 68.2
BcaC08g44241 Brassica carinata HOM05D007484 ORTHO05D008290 5.8e-136 488.0 435 63.9
C06p16450 Brassica napus HOM05D007484 ORTHO05D008290 3.9e-108 395.6 282 73.0
BolC6t36848H Brassica oleracea HOM05D007484 ORTHO05D008290 3.9e-108 395.6 282 73.0
A01p30150 Brassica napus HOM05D007484 ORTHO05D008290 8.7e-108 394.4 282 72.7
Sp2g03170 Schrenkiella parvula HOM05D007484 ORTHO05D008290 1.4e-89 334.0 453 44.6
Thhalv10024043m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 4.4e-83 312.4 427 43.6
Thhalv10023845m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 2.2e-82 310.1 407 45.2
Thhalv10024022m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 2.8e-82 309.7 444 43.7
Thhalv10023878m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.8e-81 307.0 445 42.5
AL2G15000 Arabidopsis lyrata HOM05D007484 ORTHO05D008290 3.6e-77 292.7 454 41.4
AL2G15010 Arabidopsis lyrata HOM05D007484 ORTHO05D008290 2.3e-76 290.0 454 40.1
Thhalv10023885m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 3.0e-76 289.7 427 41.9
BcaB04g20332 Brassica carinata HOM05D007484 ORTHO05D008290 5.2e-76 288.9 273 60.8
Thhalv10023802m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 1.7e-74 283.9 429 42.4
Thhalv10023947m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 3.5e-72 276.2 366 46.4
BraA01t03151Z Brassica rapa HOM05D007484 ORTHO05D008290 1.5e-70 270.8 228 64.0
AT1G61330 Arabidopsis thaliana HOM05D007484 ORTHO05D008290 7.2e-70 268.5 456 39.3
Sp2g04890 Schrenkiella parvula HOM05D007484 ORTHO05D008290 8.8e-68 261.5 398 40.2
AT1G61320 Arabidopsis thaliana HOM05D007484 ORTHO05D008290 1.5e-67 260.8 455 38.5
Thhalv10024091m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 6.3e-66 255.4 282 52.1
Carub.0002s1104 Capsella rubella HOM05D007484 ORTHO05D008290 1.1e-65 254.6 455 37.4
Carub.0002s1064 Capsella rubella HOM05D007484 ORTHO05D008290 2.4e-65 253.4 453 37.5
Carub.0005s0816 Capsella rubella HOM05D007484 ORTHO05D008290 9.1e-65 251.5 455 37.8
Carub.0002s1106 Capsella rubella HOM05D007484 ORTHO05D008290 1.6e-64 250.8 455 36.5
Thhalv10023839m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 7.7e-64 248.4 278 50.4
Thhalv10024036m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 7.7e-64 248.4 426 39.0
Sp2g04880 Schrenkiella parvula HOM05D007484 ORTHO05D008290 3.6e-61 239.6 351 43.3
Carub.0002s1107 Capsella rubella HOM05D007484 ORTHO05D008290 4.4e-51 206.1 302 41.1
C06p16460 Brassica napus HOM05D007484 ORTHO05D008290 3.5e-48 196.4 114 92.1
BraA01t03150Z Brassica rapa HOM05D007484 ORTHO05D008290 5.2e-44 182.6 102 93.1
Aa31LG2G9340 Aethionema arabicum HOM05D007484 ORTHO05D008290 2.2e-42 177.2 411 32.1
CARHR051310 Cardamine hirsuta HOM05D007484 ORTHO05D008290 9.8e-35 151.8 257 37.4
THA.LOC104809547 Tarenaya hassleriana HOM05D007484 ORTHO05D008290 9.2e-33 145.2 444 24.8
CARHR053380 Cardamine hirsuta HOM05D007484 ORTHO05D008290 3.6e-29 133.3 214 40.7
Haze_06572 Corylus avellana HOM05D007484 ORTHO05D008290 4.4e-19 99.8 431 23.9
Actinidia26998 Actinidia chinensis HOM05D007484 ORTHO05D008290 1.2e-16 91.7 381 26.2
Thhalv10023890m.g Eutrema salsugineum HOM05D007484 ORTHO05D008290 2.1e-16 90.9 93 49.5
Dinv40482 Davidia involucrata HOM05D007484 ORTHO05D008290 4.6e-16 89.7 407 23.3
Nn1g06758 Nelumbo nucifera HOM05D007484 ORTHO05D008290 4.6e-16 89.7 420 21.4
CARHR053390 Cardamine hirsuta HOM05D007484 ORTHO05D008290 1.0e-15 88.6 94 48.9
Potri.004G034500 Populus trichocarpa HOM05D007484 ORTHO05D008290 5.1e-15 86.3 434 22.6
Sabra11G0029500 Salix brachista HOM05D007484 ORTHO05D008290 6.6e-15 85.9 410 22.7
Potri.011G042900 Populus trichocarpa HOM05D007484 ORTHO05D008290 8.7e-15 85.5 440 22.7
QL04p018320 Quercus lobata HOM05D007484 ORTHO05D008290 8.7e-15 85.5 416 22.4
Eucgr.D00711 Eucalyptus grandis HOM05D007484 ORTHO05D008290 7.3e-14 82.4 282 23.8
TAR626G0438 Trochodendron aralioides HOM05D007484 ORTHO05D008290 1.6e-13 81.3 423 21.3
BolC6t36849H Brassica oleracea HOM05D007484 ORTHO05D008290 6.2e-13 79.3 47 87.2
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 2.4e-12 77.4 391 20.7
TWI63G0466 Tripterygium wilfordii HOM05D007484 ORTHO05D008290 6.9e-12 75.9 223 30.0
Medtr7g076570 Medicago truncatula HOM05D007484 ORTHO05D008290 1.2e-11 75.1 414 21.0
Duzib192G0019 Durio zibethinus HOM05D007484 ORTHO05D008290 2.0e-11 74.3 287 23.7
PGR004G1436 Punica granatum HOM05D007484 ORTHO05D008290 2.6e-11 73.9 422 20.4
Phvul.006G192000 Phaseolus vulgaris HOM05D007484 ORTHO05D008290 3.4e-11 73.6 333 23.4
Atru.chr10.2009 Acer truncatum HOM05D007484 ORTHO05D008290 4.4e-11 73.2 435 21.4
Rhsim13G0170100 Rhododendron simsii HOM05D007484 ORTHO05D008290 2.2e-10 70.9 423 22.5
GSVIVG01003193001 Vitis vinifera HOM05D007484 ORTHO05D003151 4.9e-10 69.7 286 26.6
VMungo0540G2082 Vigna mungo HOM05D007484 ORTHO05D008290 8.4e-10 68.9 397 23.4
Peaxi162Scf00149g00517 Petunia axillaris HOM05D007484 ORTHO05D008290 2.7e-08 63.9 413 23.5
Prupe.4G036700 Prunus persica HOM05D007484 ORTHO05D008290 6.0e-08 62.8 412 21.1
Lalb_Chr20g0122271 Lupinus albus HOM05D007484 ORTHO05D008290 1.9e-06 57.8 300 23.3
Cpa.g.sc27.126 Carica papaya HOM05D007484 ORTHO05D008290 3.3e-06 57.0 286 21.7
Peaxi162Scf00083g00015 Petunia axillaris HOM05D007484 ORTHO05D008290 4.3e-06 56.6 407 21.9
PGSC0003DMG400037537 Solanum tuberosum HOM05D007484 ORTHO05D008290 4.3e-06 56.6 421 21.9
Oeu024369.3 Olea europaea HOM05D003242 ORTHO05D003593 7.3e-06 55.8 117 28.2
Cpa.g.sc27.122 Carica papaya HOM05D007484 ORTHO05D008290 9.6e-06 55.5 287 22.3


User provided reference genes

Program Settings