Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 6.7e-40 166.8 78 100.0
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 6.7e-40 166.8 78 100.0
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 6.7e-40 166.8 78 100.0
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 97.4
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 97.4
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 97.4
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 9.7e-39 162.9 78 97.4
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 1.3e-38 162.5 78 96.2
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-38 162.5 78 97.4
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 2.2e-38 161.8 78 97.4
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 2.2e-38 161.8 78 97.4
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 2.8e-38 161.4 78 97.4
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 3.7e-38 161.0 78 96.2
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-38 161.0 78 96.2
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-38 161.0 77 97.4
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 4.8e-38 160.6 78 96.2
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 4.8e-38 160.6 78 96.2
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 6.3e-38 160.2 76 98.7
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 8.2e-38 159.8 78 96.2
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-37 159.5 76 97.4
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 2.4e-37 158.3 78 94.9
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 2.4e-37 158.3 78 94.9
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-36 154.8 79 93.7
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-36 154.8 79 93.7
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 2.6e-36 154.8 79 93.7
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-34 148.7 85 85.9
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-34 148.7 85 85.9
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-34 148.7 85 85.9
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-34 148.7 85 85.9
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-34 148.7 85 85.9
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 7.2e-34 146.7 86 83.7
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 9.4e-34 146.4 85 84.7
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 9.4e-34 146.4 85 84.7
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 9.4e-34 146.4 85 84.7
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 1.4e-32 142.5 78 87.2
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 1.4e-32 142.5 85 83.5
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 9.8e-31 136.3 78 82.1
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 8.5e-27 123.2 56 94.6
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 2.2e-22 108.6 78 69.2
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 4.9e-22 107.5 78 66.7
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 6.3e-22 107.1 89 60.7
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.1e-21 106.3 78 67.9
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 2.4e-21 105.1 78 65.4
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 3.1e-21 104.8 78 65.4
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 3.1e-21 104.8 80 62.5
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 3.5e-20 101.3 80 61.2
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.3e-19 98.6 91 52.7
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 3.8e-19 97.8 90 54.4
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 3.8e-19 97.8 90 55.6
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 3.8e-19 97.8 90 54.4
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.8e-19 97.8 91 54.9
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 5.0e-19 97.4 90 55.6
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.6e-19 96.7 89 55.1
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 1.1e-18 96.3 90 52.2
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-18 95.5 91 51.6
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-18 95.5 91 52.7
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 5.5e-18 94.0 93 50.5
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 5.5e-18 94.0 93 50.5
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.5e-18 94.0 91 50.5
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 9.5e-18 93.2 93 49.5
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 9.5e-18 93.2 93 49.5
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.2e-17 92.8 91 53.8
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 1.6e-17 92.4 90 53.3
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 2.1e-17 92.0 90 53.3
BolC1t03757H Brassica oleracea HOM05D007338 ORTHO05D009406 2.1e-17 92.0 77 66.2
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.8e-17 91.7 91 53.8
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 4.7e-17 90.9 93 48.4
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 4.7e-17 90.9 93 48.4
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 6.1e-17 90.5 80 62.5
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 6.1e-17 90.5 90 53.3
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.1e-17 90.5 90 51.1
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 1.4e-16 89.4 83 51.8
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 1.8e-16 89.0 83 54.2
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 3.0e-16 88.2 76 55.3
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.0e-16 88.2 100 48.0
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 8.9e-16 86.7 94 50.0
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-15 84.7 81 54.3
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.7e-14 82.4 98 44.9
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.4e-13 78.6 90 45.6
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 1.2e-12 76.3 89 50.6
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 2.0e-12 75.5 89 50.6
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 3.5e-12 74.7 89 50.6
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.6e-12 74.3 96 43.8
A09p17150 Brassica napus HOM05D007338 ORTHO05D009406 7.8e-12 73.6 78 52.6
BraA09t37346Z Brassica rapa HOM05D007338 ORTHO05D009406 7.8e-12 73.6 78 52.6
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.8e-12 73.6 84 46.4
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 1.5e-10 69.3 78 44.9
CARHR284260 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.2e-09 66.2 58 55.2
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.6e-09 65.9 92 39.1
C01p38050 Brassica napus HOM05D007338 ORTHO05D009406 1.0e-08 63.2 35 94.3
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.8e-08 62.4 78 47.4
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.9e-08 60.1 47 48.9


User provided reference genes

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