Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 1.5e-39 165.6 78 100.0
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 2.0e-39 165.2 78 98.7
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 2.0e-39 165.2 78 98.7
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 2.0e-39 165.2 78 98.7
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 3.3e-39 164.5 78 98.7
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 97.4
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 4.4e-39 164.1 78 98.7
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 98.7
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 98.7
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 5.7e-39 163.7 78 98.7
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 7.4e-39 163.3 78 98.7
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 7.4e-39 163.3 78 98.7
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 9.7e-39 162.9 78 98.7
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 1.3e-38 162.5 78 97.4
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-38 162.5 78 97.4
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-38 162.5 77 98.7
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 1.7e-38 162.2 78 97.4
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 1.7e-38 162.2 76 100.0
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 1.7e-38 162.2 78 97.4
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 2.8e-38 161.4 78 97.4
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-38 161.0 76 98.7
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 8.2e-38 159.8 78 96.2
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 8.2e-38 159.8 78 96.2
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 9.1e-37 156.4 79 94.9
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 9.1e-37 156.4 79 94.9
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 9.1e-37 156.4 79 94.9
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-35 150.2 85 87.1
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-35 150.2 85 87.1
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-35 150.2 85 87.1
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-35 150.2 85 87.1
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 6.5e-35 150.2 85 87.1
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 2.5e-34 148.3 86 84.9
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 3.2e-34 147.9 85 85.9
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 3.2e-34 147.9 85 85.9
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 3.2e-34 147.9 85 85.9
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 3.6e-33 144.4 78 88.5
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 4.7e-33 144.1 85 84.7
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 2.6e-31 138.3 78 83.3
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 2.2e-27 125.2 56 96.4
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 1.7e-22 109.0 89 61.8
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 2.2e-22 108.6 78 69.2
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 4.9e-22 107.5 78 66.7
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 6.3e-22 107.1 78 66.7
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 8.3e-22 106.7 78 66.7
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 8.3e-22 106.7 80 63.8
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.1e-21 106.3 78 67.9
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 9.1e-21 103.2 80 62.5
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.9e-20 100.5 91 53.8
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-19 99.8 90 55.6
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-19 99.8 90 56.7
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 1.0e-19 99.8 90 55.6
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.0e-19 99.8 91 56.0
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 1.3e-19 99.4 90 56.7
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 2.9e-19 98.2 90 53.3
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.0e-19 97.4 91 52.7
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.0e-19 97.4 91 53.8
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.6e-19 97.1 89 55.1
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 1.5e-18 95.9 93 51.6
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 1.5e-18 95.9 93 51.6
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.5e-18 95.9 91 51.6
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 2.5e-18 95.1 93 50.5
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 2.5e-18 95.1 93 50.5
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 3.3e-18 94.7 91 54.9
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 4.2e-18 94.4 90 54.4
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 5.5e-18 94.0 90 54.4
BolC1t03757H Brassica oleracea HOM05D007338 ORTHO05D009406 7.2e-18 93.6 77 67.5
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.2e-18 93.6 91 54.9
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 1.2e-17 92.8 93 49.5
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 1.2e-17 92.8 93 49.5
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.6e-17 92.4 79 62.0
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 1.6e-17 92.4 90 54.4
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.6e-17 92.4 90 52.2
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 3.6e-17 91.3 83 53.0
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 4.7e-17 90.9 83 55.4
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.0e-17 90.1 100 49.0
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 1.0e-16 89.7 76 56.6
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 2.3e-16 88.6 94 51.1
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 8.9e-16 86.7 81 55.6
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 7.5e-15 83.6 98 44.9
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.4e-13 78.6 90 45.6
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 3.2e-13 78.2 89 51.7
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 5.4e-13 77.4 89 51.7
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 9.2e-13 76.6 89 51.7
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.2e-12 76.3 96 44.8
A09p17150 Brassica napus HOM05D007338 ORTHO05D009406 2.7e-12 75.1 79 53.2
BraA09t37346Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-12 75.1 79 53.2
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.7e-12 75.1 84 47.6
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 1.1e-10 69.7 78 44.9
CARHR284260 Cardamine hirsuta HOM05D007338 ORTHO05D009406 9.5e-10 66.6 58 55.2
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.5e-10 66.6 92 39.1
C01p38050 Brassica napus HOM05D007338 ORTHO05D009406 1.0e-08 63.2 35 94.3
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.4e-08 62.8 78 47.4
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.0e-08 61.2 47 48.9


User provided reference genes

Program Settings