Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 7.8e-244 846.7 418 100.0
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 6.4e-238 827.0 417 98.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.7e-235 816.6 417 96.4
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 6.7e-219 763.8 422 89.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.6e-215 751.9 424 89.2
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.2e-209 732.3 421 86.5
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.7e-209 731.5 421 86.7
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.5e-207 726.1 425 86.1
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 8.5e-206 720.3 423 85.6
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.9e-205 719.2 418 88.0
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.3e-198 696.4 433 81.1
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.9e-169 598.2 425 70.4
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 8.0e-164 580.9 287 99.3
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.9e-161 571.6 417 66.9
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 6.4e-161 571.2 364 74.7
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.4e-160 569.3 360 74.4
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 3.2e-160 568.9 359 74.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 9.2e-160 567.4 412 66.7
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.0e-159 566.2 393 70.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.0e-159 566.2 412 66.7
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.7e-159 565.8 370 74.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.5e-159 565.5 412 66.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 5.9e-159 564.7 366 74.0
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.8e-159 564.3 364 72.5
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 5.0e-158 561.6 419 66.3
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 6.6e-158 561.2 384 71.1
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 8.6e-158 560.8 416 66.6
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 8.6e-158 560.8 388 69.6
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.1e-157 560.5 375 70.4
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.2e-156 557.0 401 67.8
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 2.8e-156 555.8 286 95.1
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.8e-156 555.8 360 74.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 3.6e-156 555.4 378 69.8
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 3.6e-156 555.4 383 68.1
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 4.7e-156 555.1 374 71.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 4.7e-156 555.1 364 72.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.0e-155 553.9 362 73.2
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.4e-155 553.5 375 70.4
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 8.9e-155 550.8 364 72.0
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.2e-154 550.4 366 70.8
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.6e-154 549.3 363 71.1
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.4e-154 548.5 365 72.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 5.8e-154 548.1 371 70.6
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 9.8e-154 547.4 365 71.5
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.3e-153 547.0 364 71.2
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.4e-153 544.7 362 72.1
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.4e-152 542.7 366 71.9
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 2.7e-151 539.3 366 71.6
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 7.8e-151 537.7 369 71.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.0e-150 537.3 360 70.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.3e-149 532.3 369 69.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.8e-148 529.3 364 70.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.8e-148 529.3 363 69.1
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.6e-148 528.9 360 69.4
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.7e-148 528.5 360 69.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 6.2e-148 528.1 363 69.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 6.2e-148 528.1 360 69.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.5e-146 523.5 367 68.9
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.0e-146 523.1 382 67.8
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 9.8e-146 520.8 385 66.8
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.2e-145 519.6 354 69.8
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 7.8e-143 511.1 347 69.7
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.0e-142 510.8 362 67.7
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.0e-142 510.8 385 65.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.9e-142 508.8 353 68.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.5e-141 506.9 345 71.6
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 5.2e-139 498.4 415 60.2
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 5.8e-138 495.0 379 63.9
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.3e-137 493.8 403 62.3
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.3e-137 493.8 380 63.4
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 4.9e-137 491.9 359 66.9
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.9e-136 490.0 368 66.0
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.6e-135 486.9 366 65.8
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 4.6e-135 485.3 357 66.1
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.3e-134 483.8 363 63.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 5.1e-134 481.9 361 62.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 6.6e-134 481.5 499 53.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.3e-133 478.0 368 65.5
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.7e-132 475.3 377 60.7
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.4e-131 473.0 349 65.6
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.9e-129 466.1 392 59.9
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.1e-124 449.9 353 62.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.1e-124 449.9 355 60.3
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 9.9e-122 441.0 278 74.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.5e-117 426.4 366 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.3e-116 424.1 379 55.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 4.3e-109 399.1 432 51.2
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 9.0e-107 391.3 359 53.8
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.5e-106 390.6 362 55.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 3.9e-102 375.9 345 53.0
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-95 354.4 341 51.0
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.9e-94 349.4 366 52.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 6.9e-91 338.6 364 50.3
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 8.5e-89 331.6 289 59.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.9e-73 280.0 314 48.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.5e-64 251.1 372 38.7
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.4e-59 233.8 358 40.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 5.5e-56 222.6 133 87.2
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.1e-51 206.8 108 92.6
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.1e-48 198.4 129 75.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.3e-46 190.7 129 70.5
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.5e-40 171.4 126 73.8
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.6e-39 166.8 183 48.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 7.1e-27 125.9 112 56.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.7e-23 113.2 82 64.6
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.1e-22 110.5 189 37.6
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.8e-21 106.3 148 43.9
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 5.4e-19 99.8 60 75.0
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 9.2e-19 99.0 374 26.2
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 3.3e-16 90.5 96 45.8
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.2e-15 88.6 76 56.6
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.1e-14 85.5 58 65.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 6.9e-14 82.8 224 29.9
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 3.8e-12 77.0 52 73.1
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.4e-11 73.2 179 29.6
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 9.3e-11 72.4 91 48.4


User provided reference genes

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