Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49391 Brassica carinata HOM05D007901 ORTHO05D012782 4.1e-101 371.3 176 100.0
C01p37150 Brassica napus HOM05D007901 ORTHO05D012782 4.1e-101 371.3 176 100.0
BolC1t03680H Brassica oleracea HOM05D007901 ORTHO05D012782 1.0e-99 366.7 176 98.3
BraA01t03070Z Brassica rapa HOM05D007901 ORTHO05D012782 2.7e-97 358.6 176 94.9
BcaB04g20274 Brassica carinata HOM05D007901 ORTHO05D012782 1.5e-92 342.8 176 92.6
Thhalv10023723m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 7.0e-77 290.8 175 78.3
Carub.0002s0501 Capsella rubella HOM05D007901 ORTHO05D012782 1.3e-62 243.4 168 71.4
AT1G60240 Arabidopsis thaliana HOM05D007901 ORTHO05D012782 1.4e-56 223.4 168 63.1
AL2G16410 Arabidopsis lyrata HOM05D007901 ORTHO05D012782 3.4e-55 218.8 168 61.9
CARHR052710 Cardamine hirsuta HOM05D007901 ORTHO05D012782 1.2e-39 167.2 168 50.6
CARHR052720 Cardamine hirsuta HOM05D007901 ORTHO05D012782 7.5e-39 164.5 173 50.3
BraA09t38123Z Brassica rapa HOM05D007901 ORTHO05D016734 1.2e-36 157.1 167 53.3
BcaB04g20260 Brassica carinata HOM05D007901 ORTHO05D016734 4.6e-36 155.2 171 52.6
BcaC02g10635 Brassica carinata HOM05D007901 ORTHO05D016734 9.5e-34 147.5 161 52.2
C04p26040 Brassica napus HOM05D007901 ORTHO05D016734 9.5e-34 147.5 161 52.2
BolC4t24201H Brassica oleracea HOM05D007901 ORTHO05D016734 9.5e-34 147.5 161 52.2
BcaC06g31809 Brassica carinata HOM05D007901 ORTHO05D016734 1.2e-33 147.1 166 52.4
Thhalv10023876m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 4.7e-33 145.2 172 44.8
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 5.2e-32 141.7 169 45.0
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 8.9e-32 141.0 173 42.8
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.6e-31 139.4 169 45.0
CARHR052690 Cardamine hirsuta HOM05D007901 ORTHO05D016734 7.6e-31 137.9 166 44.0
Thhalv10024006m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 9.9e-31 137.5 173 45.1
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 2.9e-30 136.0 168 42.3
A09p25480 Brassica napus HOM05D007901 ORTHO05D016734 6.4e-30 134.8 171 45.6
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 6.4e-30 134.8 167 41.9
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 1.1e-29 134.0 173 42.2
BcaB05g23805 Brassica carinata HOM05D007901 ORTHO05D016734 1.1e-29 134.0 160 47.5
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.4e-29 132.9 167 40.1
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.4e-29 131.7 167 41.9
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 7.1e-29 131.3 170 44.1
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 1.6e-28 130.2 172 41.3
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 3.5e-28 129.0 174 40.2
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 6.0e-28 128.3 159 45.3
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 6.0e-28 128.3 160 45.0
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 1.0e-27 127.5 168 39.3
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 1.0e-27 127.5 168 39.3
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 1.7e-27 126.7 159 45.9
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 2.3e-27 126.3 159 44.7
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 2.3e-27 126.3 159 44.7
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 2.3e-27 126.3 172 38.4
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 3.0e-27 125.9 164 45.7
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 3.0e-27 125.9 164 45.7
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 3.9e-27 125.6 159 44.7
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 3.9e-27 125.6 159 44.0
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 5.1e-27 125.2 167 37.1
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 5.1e-27 125.2 167 37.1
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 5.1e-27 125.2 159 45.3
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 6.6e-27 124.8 168 38.7
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 6.6e-27 124.8 168 38.7
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 8.7e-27 124.4 159 44.0
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 1.1e-26 124.0 159 44.0
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 1.1e-26 124.0 160 41.2
BcaB01g01779 Brassica carinata HOM05D007901 ORTHO05D016734 2.5e-26 122.9 147 44.9
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 2.5e-26 122.9 160 38.8
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 3.6e-25 119.0 168 37.5
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 4.7e-25 118.6 168 39.3
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 8.1e-25 117.9 152 42.8
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 2.4e-24 116.3 160 39.4
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 4.0e-24 115.5 161 38.5
Thhalv10023895m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 6.9e-24 114.8 142 45.1
Thhalv10024148m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 1.2e-23 114.0 168 40.5
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 2.0e-23 113.2 168 38.1
BcaC09g49416 Brassica carinata HOM05D007901 ORTHO05D010902 2.6e-23 112.8 146 41.8
Thhalv10024149m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 7.6e-23 111.3 164 40.9
Thhalv10024128m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 9.9e-23 110.9 167 41.3
C01p36960 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-22 110.5 145 41.4
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 4.3e-18 95.5 146 39.0
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 5.3e-16 88.6 154 35.7
BcaC04g20179 Brassica carinata HOM05D007901 ORTHO05D012782 5.4e-13 78.6 106 43.4
Sp2g04350 Schrenkiella parvula HOM05D007901 ORTHO05D010902 7.9e-12 74.7 109 36.7
C05p51210 Brassica napus HOM05D021084 ORTHO05D012782 7.6e-07 58.2 52 53.8
Actinidia05873 Actinidia chinensis HOM05D000010 ORTHO05D001550 2.9e-06 56.2 158 25.9
BcaC02g10632 Brassica carinata HOM05D007901 ORTHO05D012782 3.8e-06 55.8 69 44.9
Cpa.g.sc113.36 Carica papaya HOM05D000010 ORTHO05D013286 8.4e-06 54.7 164 29.3


User provided reference genes

Program Settings