Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p36660 Brassica napus HOM05D021146 ORTHO05D016790 3.9e-44 181.0 89 100.0
BolC1t03627H Brassica oleracea HOM05D021146 ORTHO05D016790 2.0e-43 178.7 89 98.9
BcaB06g27994 Brassica carinata HOM05D001003 ORTHO05D016790 1.6e-16 89.4 55 81.8
Carub.0002s1602 Capsella rubella HOM05D001003 ORTHO05D003884 1.9e-14 82.4 71 70.4
Thhalv10018316m.g Eutrema salsugineum HOM05D001003 ORTHO05D003884 2.6e-11 72.0 71 59.2
AL2G28530 Arabidopsis lyrata HOM05D001003 ORTHO05D003884 5.7e-11 70.9 72 62.5
AT1G69420 Arabidopsis thaliana HOM05D001003 ORTHO05D003884 5.7e-11 70.9 72 62.5
BcaB05g24450 Brassica carinata HOM05D001003 ORTHO05D003884 7.5e-11 70.5 71 60.6
BcaB03g16396 Brassica carinata HOM05D001003 ORTHO05D016790 9.8e-11 70.1 55 67.3
Sp5g24470 Schrenkiella parvula HOM05D001003 ORTHO05D003884 8.3e-10 67.0 72 58.3
A02p15900 Brassica napus HOM05D001003 ORTHO05D003884 1.1e-09 66.6 72 58.3
BraA02t06643Z Brassica rapa HOM05D001003 ORTHO05D003884 1.1e-09 66.6 72 58.3
BraA07t31159Z Brassica rapa HOM05D001003 ORTHO05D003884 1.1e-09 66.6 72 58.3
Aa31LG4G11450 Aethionema arabicum HOM05D001003 ORTHO05D003884 1.8e-09 65.9 69 53.6
A07p35720 Brassica napus HOM05D001003 ORTHO05D003884 7.0e-09 63.9 73 56.2
C06p40510 Brassica napus HOM05D001003 ORTHO05D003884 7.0e-09 63.9 73 56.2
BolC6t39380H Brassica oleracea HOM05D001003 ORTHO05D003884 7.0e-09 63.9 73 56.2
BcaB03g15893 Brassica carinata HOM05D001003 ORTHO05D003884 9.2e-09 63.5 73 56.2
BraA07t30790Z Brassica rapa HOM05D001003 ORTHO05D003884 9.2e-09 63.5 71 56.3
CARHR062300 Cardamine hirsuta HOM05D001003 ORTHO05D003884 2.7e-08 62.0 73 58.9
BcaC08g45893 Brassica carinata HOM05D001003 ORTHO05D003884 2.9e-07 58.5 72 52.8
C06p36980 Brassica napus HOM05D001003 ORTHO05D003884 2.9e-07 58.5 72 52.8
BolC6t38808H Brassica oleracea HOM05D001003 ORTHO05D003884 2.9e-07 58.5 72 52.8
BcaB03g15903 Brassica carinata HOM05D001003 ORTHO05D003884 5.0e-07 57.8 77 50.6
A07p31630 Brassica napus HOM05D001003 ORTHO05D003884 6.6e-07 57.4 71 54.9
THA.LOC104822032 Tarenaya hassleriana HOM05D001003 ORTHO05D003884 1.1e-06 56.6 57 54.4
THA.LOC104822031 Tarenaya hassleriana HOM05D001003 ORTHO05D003884 2.5e-06 55.5 57 54.4
BcaB03g15471 Brassica carinata HOM05D001003 ORTHO05D003884 7.3e-06 53.9 59 54.2
THA.LOC104822904 Tarenaya hassleriana HOM05D001003 ORTHO05D003884 9.5e-06 53.5 64 50.0


User provided reference genes

Program Settings