Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 2.3e-151 538.9 274 100.0
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 2.3e-151 538.9 274 100.0
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-150 536.6 274 99.6
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 2.0e-147 525.8 274 97.4
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 2.0e-147 525.8 274 97.4
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 9.6e-142 506.9 274 93.4
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 2.8e-141 505.4 274 92.7
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-139 499.6 275 92.0
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 2.0e-139 499.2 283 90.5
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 4.2e-137 491.5 279 89.6
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 3.6e-136 488.4 274 89.8
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.4e-121 439.9 281 79.7
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 2.2e-114 416.0 274 79.6
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 7.0e-100 367.9 264 70.5
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 1.6e-99 366.7 268 69.8
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.0e-98 364.0 260 70.8
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.0e-98 364.0 260 70.8
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 5.2e-87 325.1 278 58.3
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.5e-65 253.1 279 52.7
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 3.1e-55 219.5 181 59.7
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 3.1e-55 219.5 181 59.7
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 3.1e-55 219.5 246 51.2
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 6.4e-53 211.8 278 45.7
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 6.4e-53 211.8 280 45.7
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 6.4e-53 211.8 278 45.7
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 6.4e-53 211.8 278 45.7
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 1.1e-52 211.1 280 45.4
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 1.1e-52 211.1 280 45.4
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-50 203.8 261 45.2
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 3.0e-42 176.4 160 58.1
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 2.6e-38 163.3 267 36.3
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-35 153.7 82 95.1
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 1.1e-31 141.4 166 44.0
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.6e-30 136.7 170 44.7
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 3.4e-30 136.3 182 42.3
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.4e-30 136.3 167 41.3
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 7.6e-30 135.2 182 41.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.7e-29 134.0 168 41.1
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 1.7e-29 134.0 168 41.1
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.9e-29 133.3 168 41.1
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 2.9e-29 133.3 168 41.1
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 6.5e-29 132.1 182 41.2
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 8.4e-29 131.7 170 44.1
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.4e-28 131.0 170 42.9
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.5e-28 130.2 167 41.9
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.2e-28 129.8 167 41.3
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 5.5e-28 129.0 168 40.5
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 5.5e-28 129.0 169 41.4
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 9.3e-28 128.3 163 40.5
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 9.3e-28 128.3 163 40.5
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 9.3e-28 128.3 170 43.5
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-27 127.9 168 41.7
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.1e-27 127.1 171 43.9
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 2.7e-27 126.7 163 39.3
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 2.7e-27 126.7 163 39.3
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.5e-27 126.3 168 39.3
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 7.9e-27 125.2 335 29.9
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 1.3e-26 124.4 184 37.5
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 2.3e-26 123.6 170 40.6
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.8e-24 116.7 171 41.5
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 4.8e-24 115.9 171 37.4
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 6.3e-24 115.5 170 37.6
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-23 114.8 171 37.4
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 1.4e-23 114.4 172 36.6
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 1.8e-23 114.0 171 37.4
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 3.1e-23 113.2 171 36.3
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 3.1e-23 113.2 171 36.3
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 3.1e-23 113.2 174 38.5
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 6.9e-23 112.1 169 40.2
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 6.9e-23 112.1 171 39.8
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 9.0e-23 111.7 169 40.2
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 4.5e-22 109.4 168 36.3
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 4.5e-22 109.4 170 37.6
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 7.6e-22 108.6 168 36.3
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 7.6e-22 108.6 168 36.3
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 3.8e-21 106.3 168 35.7
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 3.8e-21 106.3 168 35.7
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 3.8e-21 106.3 168 35.7
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 3.8e-21 106.3 171 38.6
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.1e-20 104.8 164 37.8
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-20 104.8 169 38.5
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-20 104.8 169 38.5
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.1e-20 104.8 169 38.5
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.4e-20 104.4 173 34.7
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 2.5e-20 103.6 170 37.1
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 2.5e-20 103.6 174 33.9
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 3.2e-20 103.2 171 38.6
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 4.2e-20 102.8 169 37.9
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 5.5e-20 102.4 173 38.7
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 5.5e-20 102.4 170 37.1
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.2e-19 101.3 168 38.7
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-17 94.7 132 37.9
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 2.8e-16 90.1 169 31.4
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 1.4e-15 87.8 103 42.7
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 2.4e-15 87.0 169 34.3
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 4.1e-15 86.3 132 35.6
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.5e-14 84.3 88 50.0
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.0e-13 81.6 100 40.0
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 1.2e-11 74.7 94 42.6
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 2.1e-11 73.9 94 42.6
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 5.7e-09 65.9 61 49.2
BcaC06g33640 Brassica carinata HOM05D007461 ORTHO05D093415 4.1e-07 59.7 69 44.9
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 9.1e-07 58.5 154 29.2
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 9.1e-07 58.5 155 28.4
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 4.5e-06 56.2 159 25.8


User provided reference genes

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