Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 2.9e-134 481.9 238 100.0
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 5.0e-54 215.3 125 88.0
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 5.0e-54 215.3 125 88.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 5.0e-54 215.3 125 88.0
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 3.6e-52 209.1 111 94.6
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 4.0e-51 205.7 125 85.6
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 3.4e-50 202.6 125 84.8
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 3.3e-45 186.0 125 78.4
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.3e-45 185.7 125 78.4
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 1.2e-44 184.1 125 77.6
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 1.2e-44 184.1 125 77.6
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 8.1e-44 181.4 125 76.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 5.2e-43 178.7 125 76.0
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 5.2e-43 178.7 125 76.0
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 8.9e-43 177.9 125 76.0
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.2e-42 177.6 125 76.0
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 1.2e-42 177.6 125 75.2
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 1.2e-42 177.6 111 83.8
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 4.4e-42 175.6 125 74.4
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 4.4e-42 175.6 125 73.6
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 5.8e-42 175.3 125 75.2
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 9.9e-42 174.5 125 75.2
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.3e-41 174.1 125 73.6
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.3e-41 174.1 125 73.6
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 8.3e-41 171.4 125 72.0
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 8.3e-41 171.4 125 72.0
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 8.3e-41 171.4 125 73.6
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.1e-40 171.0 115 78.3
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.4e-40 170.6 125 72.8
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.2e-39 167.5 129 71.3
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.2e-39 167.5 129 71.3
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.2e-39 167.5 129 71.3
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.2e-39 167.5 129 71.3
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.2e-39 167.5 125 72.8
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 2.1e-39 166.8 124 75.0
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 2.1e-39 166.8 124 75.0
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 3.5e-39 166.0 127 71.7
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.6e-39 165.6 125 72.0
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.6e-39 165.6 125 72.0
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 4.6e-39 165.6 125 72.0
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 2.3e-38 163.3 144 65.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 3.0e-38 162.9 125 70.4
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 6.6e-38 161.8 125 68.8
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 1.5e-37 160.6 125 69.6
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.5e-37 160.6 125 69.6
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.5e-37 160.6 111 77.5
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 3.3e-37 159.5 125 70.4
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 4.3e-37 159.1 125 69.6
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 7.3e-37 158.3 112 75.9
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 9.5e-37 157.9 125 70.4
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.6e-36 156.0 125 68.8
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.7e-36 155.6 111 76.6
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 6.2e-36 155.2 120 69.2
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.1e-36 154.8 125 68.8
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.8e-35 153.7 125 67.2
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 4.0e-35 152.5 125 65.6
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 8.9e-35 151.4 123 68.3
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-34 151.0 166 55.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-34 151.0 125 66.4
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-34 151.0 125 68.0
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-34 149.8 125 67.2
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 5.8e-34 148.7 125 66.4
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 9.9e-34 147.9 125 64.0
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 9.9e-34 147.9 129 64.3
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.8e-33 146.0 105 74.3
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-33 146.0 125 66.4
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-33 145.2 144 59.0
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 7.1e-32 141.7 107 73.8
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 2.1e-31 140.2 131 62.6
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 7.8e-31 138.3 125 63.2
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-30 137.5 116 65.5
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-30 136.3 98 74.5
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 3.9e-30 136.0 98 73.5
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.1e-30 135.6 131 60.3
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 8.7e-30 134.8 120 64.2
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 3.3e-29 132.9 114 64.0
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 5.6e-29 132.1 127 64.6
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 1.4e-27 127.5 85 81.2
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-26 124.4 89 73.0
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 1.5e-26 124.0 125 59.2
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 9.9e-26 121.3 70 91.4
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-25 120.2 108 65.7
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.1e-24 117.9 108 65.7
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-24 117.1 125 55.2
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-24 115.9 125 56.0
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.5e-23 112.8 111 60.4
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 6.0e-23 112.1 102 61.8
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 6.6e-22 108.6 111 60.4
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 2.5e-21 106.7 103 61.2
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.5e-21 106.7 111 55.0
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 4.0e-19 99.4 125 49.6
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-18 97.4 108 55.6
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-18 95.9 125 50.4
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 2.9e-17 93.2 92 60.9
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-16 91.3 89 64.0
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 1.4e-16 90.9 77 62.3
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-16 89.4 125 48.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 9.3e-16 88.2 60 76.7
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-15 87.8 78 66.7
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-15 86.3 125 47.2
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-14 84.7 71 67.6
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 3.9e-14 82.8 63 69.8
BcaC01g01473 Brassica carinata HOM05D001560 ORTHO05D003613 1.1e-13 81.3 41 95.1
C03p92380 Brassica napus HOM05D001560 ORTHO05D003613 1.1e-13 81.3 41 95.1
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-12 75.9 105 46.7
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-11 74.3 65 63.1
CAN.G497.19 Capsicum annuum HOM05D001560 ORTHO05D003613 5.8e-10 68.9 52 67.3
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 3.8e-09 66.2 41 78.0
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-09 65.5 39 74.4
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-08 62.8 37 78.4
Sopen11g021670 Solanum pennellii HOM05D001560 ORTHO05D003613 5.5e-08 62.4 50 64.0
Solyc09g057820.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 7.9e-07 58.5 111 38.7
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 6.7e-06 55.5 62 50.0


User provided reference genes

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