Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34970 Brassica napus HOM05D003430 ORTHO05D014065 3.6e-70 268.1 129 100.0
BolC1t03463H Brassica oleracea HOM05D003430 ORTHO05D014065 3.6e-70 268.1 129 100.0
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 2.0e-49 199.1 121 82.6
BraSC48t46246Z Brassica rapa HOM05D003430 ORTHO05D014065 2.0e-49 199.1 121 82.6
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 5.0e-48 194.5 122 82.0
arahy.Tifrunner.gnm1.ann1.MTT5DF Arachis hypogaea HOM05D003430 ORTHO05D014065 5.0e-32 141.4 108 71.3
arahy.Tifrunner.gnm1.ann1.B82PT4 Arachis hypogaea HOM05D003430 ORTHO05D014065 1.2e-30 136.7 104 69.2
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 1.4e-29 133.3 119 65.5
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 5.9e-25 117.9 91 70.3
BraSC77t46629Z Brassica rapa HOM05D003430 ORTHO05D014065 1.2e-20 103.6 56 91.1
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 1.4e-18 96.7 63 77.8
BraSC54t46374Z Brassica rapa HOM05D003430 ORTHO05D014065 2.7e-17 92.4 49 93.9
arahy.Tifrunner.gnm1.ann1.U8L35G Arachis hypogaea HOM05D003430 ORTHO05D014065 3.3e-15 85.5 105 50.5
BraSC177t45749Z Brassica rapa HOM05D003430 ORTHO05D026951 1.1e-13 80.5 62 69.4
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 2.0e-12 76.3 43 83.7
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 3.4e-12 75.5 50 68.0
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 1.9e-10 69.7 90 50.0
Sc11g0004430 Simmondsia chinensis HOM05D003430 ORTHO05D014065 1.6e-09 66.6 36 91.7
arahy.Tifrunner.gnm1.ann1.FZ2FI3 Arachis hypogaea HOM05D003430 ORTHO05D014065 7.8e-09 64.3 36 88.9
arahy.Tifrunner.gnm1.ann1.MDP5TU Arachis hypogaea HOM05D003430 ORTHO05D014065 7.8e-09 64.3 36 88.9
arahy.Tifrunner.gnm1.ann1.SLB19S Arachis hypogaea HOM05D003430 ORTHO05D014065 7.8e-09 64.3 36 88.9
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-08 62.8 36 88.9
Dinv06858 Davidia involucrata HOM05D003430 ORTHO05D014065 3.9e-08 62.0 38 81.6
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.1e-07 60.5 36 83.3
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 1.2e-06 57.0 30 86.7
Hma1.2p1_0040F.1_g025060 Hydrangea macrophylla HOM05D003430 ORTHO05D014065 2.1e-06 56.2 80 48.8
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 3.6e-06 55.5 42 66.7


User provided reference genes

Program Settings