Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34890 Brassica napus HOM05D008814 ORTHO05D010812 2.2e-54 215.3 102 100.0
C01p34810 Brassica napus HOM05D008814 ORTHO05D010812 1.3e-51 206.1 102 95.1
BcaC02g09030 Brassica carinata HOM05D008814 ORTHO05D010812 7.2e-50 200.3 102 93.1
A04p09340 Brassica napus HOM05D008814 ORTHO05D010812 7.2e-50 200.3 102 93.1
BolSC28t60310H Brassica oleracea HOM05D008814 ORTHO05D010812 7.2e-50 200.3 102 93.1
BolSC28t60366H Brassica oleracea HOM05D008814 ORTHO05D010812 7.2e-50 200.3 102 93.1
BraSC48t46234Z Brassica rapa HOM05D008814 ORTHO05D010812 7.2e-50 200.3 102 93.1
BcaC09g49585 Brassica carinata HOM05D008814 ORTHO05D010812 2.1e-49 198.7 102 92.2
CAN.G960.18 Capsicum annuum HOM05D008814 ORTHO05D010812 1.8e-37 159.1 101 79.2
Solyc00g500343.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 3.5e-36 154.8 101 78.2
CAN.G1109.2 Capsicum annuum HOM05D008814 ORTHO05D010812 4.5e-36 154.5 101 76.2
GSVIVG01005452001 Vitis vinifera HOM05D008814 ORTHO05D010812 1.0e-35 153.3 94 79.8
Solyc08g036500.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 1.1e-34 149.8 101 75.2
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 4.7e-33 144.4 77 88.3
CAN.G1.21 Capsicum annuum HOM05D008814 ORTHO05D010812 2.3e-32 142.1 101 72.3
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 2.0e-28 129.0 62 95.2
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.9e-28 127.5 72 83.3
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.9e-28 127.5 72 83.3
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.9e-28 127.5 72 83.3
CsaV3_7G023800 Cucumis sativus L. HOM05D008814 ORTHO05D010812 5.0e-27 124.4 72 80.6
PGSC0003DMG400033609 Solanum tuberosum HOM05D008814 ORTHO05D010812 1.9e-26 122.5 77 77.9
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 4.2e-26 121.3 84 71.4
Nitab4.5_0014940g0030 Nicotiana tabacum HOM05D008814 ORTHO05D010812 6.1e-25 117.5 101 64.4
SHI04841 Sapria himalayana HOM05D008814 ORTHO05D010812 4.0e-24 114.8 96 63.5
Nitab4.5_0000172g1910 Nicotiana tabacum HOM05D008814 ORTHO05D010812 9.8e-23 110.2 80 65.0
Sopen05g009620 Solanum pennellii HOM05D008814 ORTHO05D010812 1.1e-21 106.7 82 64.6
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 4.5e-20 101.3 92 57.6
BcaC02g09031 Brassica carinata HOM05D008814 ORTHO05D010812 3.8e-19 98.2 64 71.9
MELO3C027941.2 Cucumis melo HOM05D008814 ORTHO05D010812 9.5e-18 93.6 57 75.4
Nn2g10474 Nelumbo nucifera HOM05D008814 ORTHO05D010812 4.7e-17 91.3 86 53.5
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 1.8e-16 89.4 57 71.9
Nn8g40503 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.2e-16 87.8 62 67.7
Nn1g09507 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.2e-15 86.7 62 67.7
Solyc08g036535.1 Solanum lycopersicum HOM05D018954 ORTHO05D010812 2.0e-15 85.9 62 71.0
Lj2P1215T12 Lonicera japonica HOM05D008814 ORTHO05D010812 3.4e-15 85.1 59 69.5
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 2.9e-14 82.0 105 49.5
COL.COLO4_04435 Corchorus olitorius HOM05D018954 ORTHO05D010812 4.9e-14 81.3 60 71.7
COL.COLO4_04461 Corchorus olitorius HOM05D018954 ORTHO05D010812 4.9e-14 81.3 60 71.7
COL.COLO4_04488 Corchorus olitorius HOM05D018954 ORTHO05D010812 4.9e-14 81.3 60 71.7
MELO3C013036.2 Cucumis melo HOM05D008814 ORTHO05D010812 8.3e-14 80.5 51 70.6
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 1.3e-11 73.2 46 78.3
ATR0987G010 Amborella trichopoda HOM05D008814 ORTHO05D010812 3.9e-11 71.6 53 71.7
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 4.3e-10 68.2 42 78.6
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 4.3e-10 68.2 42 78.6
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 4.3e-10 68.2 42 78.6
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 4.3e-10 68.2 42 78.6
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 9.5e-10 67.0 52 63.5
Nitab4.5_0000478g0040 Nicotiana tabacum HOM05D008814 ORTHO05D010812 1.6e-09 66.2 38 81.6
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 2.1e-09 65.9 56 60.7
Nn1g10191 Nelumbo nucifera HOM05D008814 ORTHO05D010812 8.0e-09 63.9 53 58.5
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 1.4e-08 63.2 31 90.3
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 4.0e-08 61.6 42 69.0
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 2.9e-06 55.5 30 83.3
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 2.9e-06 55.5 69 42.0
TPR.G32938 Trifolium pratense HOM05D000951 ORTHO05D003644 8.3e-06 53.9 59 45.8


User provided reference genes

Program Settings