Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 5.5e-113 411.0 211 100.0
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 3.5e-107 391.7 211 95.7
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 3.5e-107 391.7 211 95.7
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 3.5e-107 391.7 211 95.7
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 3.4e-94 348.6 186 95.2
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 3.4e-94 348.6 186 95.2
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 6.8e-79 297.7 170 90.0
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 6.9e-71 271.2 185 80.5
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 9.0e-71 270.8 185 80.5
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 5.8e-70 268.1 185 79.5
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 1.9e-68 263.1 185 78.4
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.4e-61 237.7 185 71.9
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.4e-61 237.7 185 71.9
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 5.4e-60 235.0 185 71.9
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 5.4e-60 235.0 185 71.9
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 2.1e-59 233.0 185 70.8
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 5.1e-58 228.4 185 69.7
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 8.7e-58 227.6 185 70.8
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 8.7e-58 227.6 185 70.8
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 9.6e-57 224.2 178 70.2
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 9.6e-57 224.2 178 70.2
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 1.3e-56 223.8 158 77.8
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 1.3e-56 223.8 185 69.2
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 2.8e-56 222.6 185 69.2
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 3.7e-56 222.2 185 69.2
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 3.7e-56 222.2 185 69.2
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 3.7e-56 222.2 185 69.2
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 4.8e-56 221.9 185 68.1
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 8.1e-56 221.1 185 68.1
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 2.4e-55 219.5 185 69.2
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 2.4e-55 219.5 185 69.2
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 3.1e-55 219.2 185 68.6
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 6.9e-55 218.0 184 69.0
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 6.9e-55 218.0 184 69.0
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.5e-54 216.9 182 68.1
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 3.4e-54 215.7 185 67.0
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 3.4e-54 215.7 185 67.0
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 5.8e-54 214.9 184 66.8
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 5.8e-54 214.9 184 68.5
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 7.6e-54 214.5 139 81.3
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.7e-53 213.4 184 66.3
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 2.9e-53 212.6 174 69.0
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 2.9e-53 212.6 174 69.0
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 2.9e-53 212.6 134 82.1
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 4.9e-53 211.8 185 67.0
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 8.4e-53 211.1 185 67.0
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 1.4e-52 210.3 185 65.9
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 3.2e-52 209.1 183 66.1
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 9.3e-52 207.6 142 77.5
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 1.2e-51 207.2 176 66.5
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-51 204.5 162 71.0
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 7.9e-51 204.5 182 64.3
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 7.9e-51 204.5 184 65.2
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 7.9e-51 204.5 184 65.2
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.0e-50 202.6 134 77.6
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 5.1e-50 201.8 139 77.7
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 1.1e-49 200.7 146 76.0
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 1.5e-49 200.3 162 69.8
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 5.3e-47 191.8 152 70.4
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 5.3e-47 191.8 129 76.7
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 2.0e-46 189.9 178 62.4
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 7.6e-46 188.0 166 66.3
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 2.2e-45 186.4 133 75.2
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 3.8e-45 185.7 134 75.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 6.5e-45 184.9 150 69.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 6.5e-45 184.9 150 69.3
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 7.1e-44 181.4 119 79.0
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 1.6e-43 180.3 142 69.7
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 2.1e-43 179.9 119 80.7
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 2.1e-43 179.9 119 80.7
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 7.9e-43 177.9 107 86.0
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 1.5e-41 173.7 96 90.6
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.9e-41 173.3 107 85.0
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 3.3e-41 172.6 158 64.6
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 3.3e-41 172.6 154 63.6
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 3.3e-41 172.6 109 82.6
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 4.5e-38 162.2 100 82.0
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 4.5e-38 162.2 134 67.9
CAN.G649.12 Capsicum annuum HOM05D007533 ORTHO05D009622 1.6e-27 127.1 78 83.3
Lsat_1_v5_gn_5_43041 Lactuca sativa HOM05D007533 ORTHO05D009622 1.5e-25 120.6 115 62.6
BolC1t03447H Brassica oleracea HOM05D007533 ORTHO05D009622 1.8e-23 113.6 99 67.7
C03p57120 Brassica napus HOM05D007533 ORTHO05D009622 2.4e-23 113.2 79 75.9
BolC3t17989H Brassica oleracea HOM05D007533 ORTHO05D009622 2.4e-23 113.2 79 75.9
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 7.7e-22 108.2 107 57.9
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.2e-21 106.7 77 72.7
Peaxi162Scf01098g00011 Petunia axillaris HOM05D007533 ORTHO05D009622 2.9e-21 106.3 63 88.9
ATR0807G043 Amborella trichopoda HOM05D007533 ORTHO05D009622 2.1e-19 100.1 68 77.9
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 8.0e-19 98.2 76 71.1
HanXRQChr07g0189001 Helianthus annuus HOM05D007533 ORTHO05D009622 5.2e-18 95.5 97 60.8
BraSC54t46363Z Brassica rapa HOM05D007533 ORTHO05D009622 8.8e-18 94.7 86 65.1
Nitab4.5_0002253g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.1e-17 94.4 56 78.6
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 7.5e-17 91.7 73 67.1
Nitab4.5_0010333g0150 Nicotiana tabacum HOM05D007533 ORTHO05D009622 8.2e-16 88.2 86 60.5
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-15 85.9 76 63.2
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 1.6e-14 84.0 65 69.2
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 1.3e-13 80.9 47 85.1
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 2.5e-12 76.6 84 57.1
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.6e-11 73.9 68 57.4
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.8e-10 70.5 123 43.1
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.5e-09 67.4 49 71.4
CDE02G0940 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 5.7e-09 65.5 40 75.0
TPR.G39970 Trifolium pratense HOM05D007533 ORTHO05D009622 2.2e-08 63.5 75 56.0
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 3.7e-08 62.8 45 73.3


User provided reference genes

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