Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 2.7e-129 465.3 233 100.0
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 8.8e-120 433.7 229 95.6
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 2.2e-115 419.1 230 93.0
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 7.9e-36 154.8 83 90.4
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 6.3e-33 145.2 83 85.5
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 6.3e-33 145.2 83 85.5
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 1.8e-32 143.7 83 84.3
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 1.8e-32 143.7 83 84.3
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 1.8e-32 143.7 83 84.3
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 4.1e-32 142.5 83 83.1
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 5.5e-29 132.1 83 75.9
CsaV3_UNG210380 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.0e-27 127.9 82 78.0
BcaC09g49596 Brassica carinata HOM05D015026 ORTHO05D015810 1.4e-27 127.5 62 98.4
BolC1t03436H Brassica oleracea HOM05D015026 ORTHO05D015810 1.4e-27 127.5 62 98.4
BraSC48t46308Z Brassica rapa HOM05D015026 ORTHO05D015810 1.4e-27 127.5 62 98.4
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 2.3e-27 126.7 83 73.5
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 2.3e-27 126.7 83 73.5
HanXRQChr00c0055g0571411 Helianthus annuus HOM05D007924 ORTHO05D010328 3.9e-27 125.9 83 73.5
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 3.9e-27 125.9 83 73.5
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 3.9e-27 125.9 83 73.5
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 5.1e-27 125.6 83 73.5
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 6.7e-27 125.2 83 73.5
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 8.8e-27 124.8 83 72.3
Thhalv10029241m.g Eutrema salsugineum HOM05D015026 ORTHO05D015810 8.8e-27 124.8 62 96.8
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 8.8e-27 124.8 83 73.5
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 2.0e-26 123.6 83 72.3
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 2.6e-26 123.2 83 72.3
Aa31csc553G40 Aethionema arabicum HOM05D015026 ORTHO05D015810 5.7e-26 122.1 149 53.0
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 72.3
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 71.1
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 71.1
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 71.1
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 71.1
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 5.7e-26 122.1 83 71.1
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 7.4e-26 121.7 83 71.1
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 9.7e-26 121.3 89 69.7
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 1.3e-25 120.9 83 72.3
AT2G07708 Arabidopsis thaliana HOM05D015026 ORTHO05D015810 2.8e-25 119.8 61 95.1
ATMG00500 Arabidopsis thaliana HOM05D015026 ORTHO05D015810 2.8e-25 119.8 61 95.1
HanXRQChr09g0250631 Helianthus annuus HOM05D007924 ORTHO05D010328 4.8e-25 119.0 73 79.5
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 6.3e-25 118.6 75 78.7
BraSC54t46355Z Brassica rapa HOM05D015026 ORTHO05D011743 1.1e-24 117.9 56 100.0
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 1.1e-24 117.9 83 68.7
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 1.8e-24 117.1 83 68.7
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 2.4e-24 116.7 83 67.5
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 2.4e-24 116.7 83 67.5
RcHm_v2.0_MTg0499211 Rosa chinensis HOM05D007924 ORTHO05D010328 2.4e-24 116.7 83 67.5
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 3.1e-24 116.3 83 68.7
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 6.9e-24 115.2 83 67.5
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 9.1e-24 114.8 83 68.7
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 5.9e-23 112.1 82 69.5
BraSC48t46342Z Brassica rapa HOM05D007924 ORTHO05D010328 1.6e-20 104.0 71 73.2
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 2.7e-20 103.2 83 63.9
HanXRQChr15g0468771 Helianthus annuus HOM05D007924 ORTHO05D010328 6.1e-20 102.1 68 72.1
BolSC28t60430H Brassica oleracea HOM05D007924 ORTHO05D010328 3.0e-19 99.8 52 92.3
Phvul.011G125800 Phaseolus vulgaris HOM05D007924 ORTHO05D010328 3.3e-18 96.3 62 75.8
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 7.0e-16 88.6 57 75.4
BolSC28t60429H Brassica oleracea HOM05D015026 ORTHO05D015810 3.5e-15 86.3 41 100.0
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 1.0e-14 84.7 73 63.0
Nitab4.5_0002418g0260 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.0e-14 82.4 62 67.7
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 3.0e-11 73.2 42 83.3
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 2.6e-10 70.1 51 64.7
MD02G1208400 Malus domestica HOM05D007924 ORTHO05D010328 2.6e-10 70.1 44 75.0
SHI38118 Sapria himalayana HOM05D007924 ORTHO05D010328 5.7e-10 68.9 47 68.1
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 4.8e-09 65.9 51 60.8
SHI34938 Sapria himalayana HOM05D007924 ORTHO05D010328 1.4e-08 64.3 74 51.4
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 1.8e-08 63.9 45 68.9


User provided reference genes

Program Settings