Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 3.8e-285 984.2 499 100.0
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 3.8e-285 984.2 499 100.0
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 6.4e-261 903.7 458 99.6
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 3.0e-242 841.6 459 93.5
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 4.3e-241 837.8 459 93.0
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 2.0e-214 749.2 466 82.6
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 5.0e-213 744.6 476 81.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 5.0e-213 744.6 476 81.1
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 1.9e-212 742.7 470 79.6
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 5.5e-212 741.1 473 78.6
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 2.8e-208 728.8 471 78.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 1.3e-200 703.4 464 76.3
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 2.8e-195 685.6 472 73.9
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 1.7e-181 639.8 478 66.1
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 2.7e-174 615.9 425 71.5
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 6.2e-155 551.6 480 56.0
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 7.9e-142 508.1 483 54.7
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 1.0e-136 491.1 518 51.9
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 1.4e-135 487.3 485 53.4
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 4.2e-135 485.7 482 53.5
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 3.5e-134 482.6 488 52.0
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 3.0e-133 479.6 496 51.6
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 4.3e-132 475.7 481 52.4
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 7.4e-132 474.9 474 53.6
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 9.7e-132 474.6 489 52.4
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 2.2e-131 473.4 445 54.4
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 6.3e-131 471.9 476 50.8
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.4e-130 470.7 497 51.3
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.8e-130 470.3 437 54.0
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 4.1e-130 469.2 471 50.7
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 4.5e-129 465.7 487 51.3
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 2.2e-128 463.4 487 49.9
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.9e-128 463.0 480 50.6
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 3.8e-128 462.6 450 52.9
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 5.0e-128 462.2 482 52.9
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 2.7e-126 456.4 392 57.4
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 7.9e-126 454.9 459 51.6
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 7.9e-126 454.9 395 57.2
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 1.4e-125 454.1 481 51.6
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 3.0e-125 453.0 478 50.2
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 2.5e-124 449.9 390 56.7
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 3.3e-124 449.5 492 49.4
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 1.3e-123 447.6 478 50.4
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 1.7e-123 447.2 482 50.6
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 6.3e-123 445.3 441 52.2
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 4.1e-122 442.6 486 50.2
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 6.9e-122 441.8 446 48.4
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 1.0e-120 438.0 432 52.3
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 3.8e-120 436.0 442 50.2
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 2.5e-119 433.3 494 46.0
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 9.4e-119 431.4 476 48.9
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.6e-118 430.6 429 54.3
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 1.6e-118 430.6 443 48.8
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 7.9e-118 428.3 425 51.8
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 5.1e-117 425.6 432 50.2
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 1.1e-116 424.5 487 47.8
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 2.0e-116 423.7 405 56.3
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 2.6e-116 423.3 425 53.4
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 2.6e-116 423.3 417 52.8
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 4.4e-116 422.5 453 49.0
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 7.4e-116 421.8 431 51.0
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 3.7e-115 419.5 419 51.8
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 1.4e-114 417.5 435 49.7
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 4.1e-114 416.0 428 48.8
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 4.1e-114 416.0 399 54.4
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 2.6e-113 413.3 418 50.2
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 3.5e-113 412.9 431 51.3
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 3.5e-113 412.9 380 53.9
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.7e-112 410.6 439 49.9
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 3.8e-112 409.5 467 47.3
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 3.8e-112 409.5 399 55.9
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 6.5e-112 408.7 434 47.2
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 7.2e-111 405.2 453 49.7
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 1.2e-110 404.4 454 50.0
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 2.7e-110 403.3 427 50.1
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 1.8e-109 400.6 431 49.9
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 6.7e-109 398.7 395 51.4
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.7e-107 392.9 356 56.5
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.7e-107 392.9 356 56.5
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 8.2e-107 391.7 355 56.9
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 3.1e-106 389.8 407 51.6
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 1.2e-105 387.9 348 55.5
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 5.9e-105 385.6 417 49.2
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 1.3e-104 384.4 354 57.1
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 9.4e-103 378.3 410 50.7
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 1.1e-98 364.8 404 48.8
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.2e-97 361.3 401 46.1
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 1.0e-96 358.2 330 55.5
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 2.2e-96 357.1 398 49.2
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 5.2e-93 345.9 344 50.6
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 1.4e-90 337.8 423 42.8
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 4.7e-86 322.8 345 49.9
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 8.0e-86 322.0 312 57.1
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 2.8e-78 297.0 334 48.8
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 6.6e-72 275.8 267 49.4
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 1.2e-65 255.0 438 34.9
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 3.4e-60 236.9 392 36.0
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 2.4e-58 230.7 435 33.1
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 2.1e-57 227.6 342 40.9
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 7.8e-57 225.7 341 36.4
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 4.0e-53 213.4 179 58.7
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 3.9e-48 196.8 294 44.2
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 1.5e-47 194.9 192 50.5
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 5.3e-45 186.4 475 30.1
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 9.6e-39 165.6 368 32.3
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 6.9e-37 159.5 169 52.7
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 5.8e-36 156.4 171 50.3
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 5.5e-34 149.8 171 50.3
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 1.5e-28 131.7 188 39.4
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 2.0e-12 78.2 102 44.1
VMungo1127G0243 Vigna mungo HOM05D006774 ORTHO05D008411 9.7e-07 59.3 61 49.2


User provided reference genes

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