Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p33620 Brassica napus HOM05D006760 ORTHO05D008121 4.0e-64 248.1 134 100.0
Sp5g15640 Schrenkiella parvula HOM05D006760 ORTHO05D008121 3.3e-42 175.3 118 81.4
BcaB01g01049 Brassica carinata HOM05D006760 ORTHO05D008121 3.2e-37 158.7 119 73.9
BcaC01g01943 Brassica carinata HOM05D006760 ORTHO05D008121 5.4e-37 157.9 118 74.6
C03p70350 Brassica napus HOM05D006760 ORTHO05D008121 5.4e-37 157.9 118 74.6
BolC3t19291H Brassica oleracea HOM05D006760 ORTHO05D008121 5.4e-37 157.9 118 74.6
Carub.0005s1175 Capsella rubella HOM05D006760 ORTHO05D008121 5.4e-37 157.9 118 72.0
Thhalv10002556m.g Eutrema salsugineum HOM05D006760 ORTHO05D008121 5.4e-37 157.9 120 75.0
CARHR154260 Cardamine hirsuta HOM05D006760 ORTHO05D008121 5.0e-35 151.4 119 72.3
A06p21180 Brassica napus HOM05D006760 ORTHO05D008121 3.3e-34 148.7 118 71.2
AL5G24580 Arabidopsis lyrata HOM05D006760 ORTHO05D008121 1.6e-33 146.4 99 79.8
BraA06t25205Z Brassica rapa HOM05D006760 ORTHO05D008121 2.1e-33 146.0 118 70.3
AT3G45900 Arabidopsis thaliana HOM05D006760 ORTHO05D008121 6.8e-32 141.0 113 69.0
Aa31LG9G15690 Aethionema arabicum HOM05D006760 ORTHO05D008121 5.4e-29 131.3 120 64.2
THA.LOC104798519 Tarenaya hassleriana HOM05D006760 ORTHO05D008121 9.5e-26 120.6 118 57.6
CiPaw.11G103800 Carya illinoinensis HOM05D006760 ORTHO05D008121 4.1e-21 105.1 111 53.2
CiPaw.12G072300 Carya illinoinensis HOM05D006760 ORTHO05D008121 3.5e-20 102.1 119 53.8
COL.COLO4_37233 Corchorus olitorius HOM05D006760 ORTHO05D008121 1.5e-18 96.7 120 46.7
Duzib205G0742 Durio zibethinus HOM05D006760 ORTHO05D008121 8.1e-17 90.9 123 46.3
Thecc.03G324900 Theobroma cacao HOM05D006760 ORTHO05D008121 1.4e-16 90.1 120 46.7
Potri.001G130100 Populus trichocarpa HOM05D006760 ORTHO05D008121 3.1e-16 89.0 112 49.1
Eucgr.D02586 Eucalyptus grandis HOM05D006760 ORTHO05D008121 5.2e-16 88.2 91 49.5
Sabra01G0100600 Salix brachista HOM05D006760 ORTHO05D008121 6.8e-16 87.8 91 54.9
TWI12G1140 Tripterygium wilfordii HOM05D006760 ORTHO05D008121 8.9e-16 87.4 98 48.0
Gohir.A12G200000 Gossypium hirsutum HOM05D006760 ORTHO05D008121 1.5e-15 86.7 124 45.2
Solyc08g075680.4 Solanum lycopersicum HOM05D006760 ORTHO05D008121 2.0e-15 86.3 98 51.0
CAN.G800.11 Capsicum annuum HOM05D006760 ORTHO05D008121 3.4e-15 85.5 101 47.5
Sopen08g024330 Solanum pennellii HOM05D006760 ORTHO05D008121 3.4e-15 85.5 94 51.1
Gohir.D12G202700 Gossypium hirsutum HOM05D006760 ORTHO05D008121 5.8e-15 84.7 110 47.3
Gorai.008G217700 Gossypium raimondii HOM05D006760 ORTHO05D008121 5.8e-15 84.7 110 47.3
Atru.chr6.2107 Acer truncatum HOM05D006760 ORTHO05D008121 7.6e-15 84.3 93 49.5
Nitab4.5_0000030g0230 Nicotiana tabacum HOM05D006760 ORTHO05D008121 1.3e-14 83.6 96 49.0
Peaxi162Scf00193g00023 Petunia axillaris HOM05D006760 ORTHO05D008121 1.3e-14 83.6 94 50.0
PGSC0003DMG400030849 Solanum tuberosum HOM05D006760 ORTHO05D008121 1.3e-14 83.6 93 49.5
Lalb_Chr16g0380681 Lupinus albus HOM05D006760 ORTHO05D008121 1.7e-14 83.2 99 49.5
Nitab4.5_0001023g0160 Nicotiana tabacum HOM05D006760 ORTHO05D008121 2.2e-14 82.8 103 45.6
Haze_08041 Corylus avellana HOM05D006760 ORTHO05D008121 2.9e-14 82.4 92 52.2
Haze_08051 Corylus avellana HOM05D006760 ORTHO05D008121 2.9e-14 82.4 92 52.2
CSS0002453 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 3.7e-14 82.0 120 41.7
Manes.15G182500 Manihot esculenta HOM05D006760 ORTHO05D008121 3.7e-14 82.0 100 46.0
CSS0041869 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 4.9e-14 81.6 120 41.7
Phvul.002G127600 Phaseolus vulgaris HOM05D006760 ORTHO05D008121 1.4e-13 80.1 100 50.0
Ah.12g056060 Amaranthus hybridus HOM05D006760 ORTHO05D008121 1.9e-13 79.7 91 46.2
Prupe.5G019400 Prunus persica HOM05D006760 ORTHO05D008121 1.9e-13 79.7 106 50.0
Dinv41816 Davidia involucrata HOM05D006760 ORTHO05D008121 2.4e-13 79.3 96 47.9
FvH4_5g24100 Fragaria vesca HOM05D006760 ORTHO05D008121 2.4e-13 79.3 100 50.0
FAN04G2385 Fragaria x ananassa HOM05D006760 ORTHO05D008121 2.4e-13 79.3 100 50.0
FAN13G0245 Fragaria x ananassa HOM05D006760 ORTHO05D008121 2.4e-13 79.3 100 50.0
FAN18G0636 Fragaria x ananassa HOM05D006760 ORTHO05D008121 2.4e-13 79.3 100 50.0
FAN18G2939 Fragaria x ananassa HOM05D006760 ORTHO05D008121 2.4e-13 79.3 100 50.0
Glyma.09G214700 Glycine max HOM05D006760 ORTHO05D008121 4.1e-13 78.6 99 50.5
Nn1g02052 Nelumbo nucifera HOM05D006760 ORTHO05D008121 4.1e-13 78.6 106 43.4
TAR629G0494 Trochodendron aralioides HOM05D006760 ORTHO05D008121 7.1e-13 77.8 92 48.9
Ciclev10001352m.g Citrus clementina HOM05D006760 ORTHO05D008121 9.2e-13 77.4 100 47.0
RcHm_v2.0_Chr7g0213631 Rosa chinensis HOM05D006760 ORTHO05D008121 9.2e-13 77.4 100 49.0
VMungo1215G0713 Vigna mungo HOM05D006760 ORTHO05D008121 1.2e-12 77.0 100 48.0
SGA_v2.0_scaffold111G31361 Striga asiatica HOM05D006760 ORTHO05D008121 1.6e-12 76.6 99 43.4
MSTRG.1766 Avicennia marina HOM05D006760 ORTHO05D008121 2.1e-12 76.3 103 45.6
Dinv37413 Davidia involucrata HOM05D006760 ORTHO05D008121 2.7e-12 75.9 93 46.2
Oeu046799.1 Olea europaea HOM05D006760 ORTHO05D008121 2.7e-12 75.9 98 45.9
unitig_699.g19677 Utricularia gibba HOM05D006760 ORTHO05D008121 2.7e-12 75.9 106 44.3
Cc00_g07450 Coffea canephora HOM05D006760 ORTHO05D008121 3.5e-12 75.5 100 43.0
Hma1.2p1_1873F.1_g306180 Hydrangea macrophylla HOM05D006760 ORTHO05D008121 4.6e-12 75.1 96 42.7
HPP92_015128 Vanilla planifolia HOM05D006760 ORTHO05D008121 6.0e-12 74.7 116 41.4
EL10Ac5g11912 Beta vulgaris HOM05D006760 ORTHO05D008121 7.8e-12 74.3 84 46.4
Cfa012614 Carpinus fangiana HOM05D006760 ORTHO05D008121 7.8e-12 74.3 111 45.9
Medtr5g026680 Medicago truncatula HOM05D006760 ORTHO05D008121 7.8e-12 74.3 101 46.5
Glyma.04G123100 Glycine max HOM05D006760 ORTHO05D008121 1.3e-11 73.6 104 48.1
Lsat_1_v5_gn_3_23361 Lactuca sativa HOM05D006760 ORTHO05D008121 1.3e-11 73.6 100 41.0
MD06G1017100 Malus domestica HOM05D006760 ORTHO05D008121 1.3e-11 73.6 102 48.0
Hund11097 Selenicereus undatus HOM05D006760 ORTHO05D008121 1.3e-11 73.6 85 45.9
HanXRQChr17g0537101 Helianthus annuus HOM05D006760 ORTHO05D008121 1.7e-11 73.2 93 44.1
SalBow8G1564 Salvia bowleyana HOM05D006760 ORTHO05D008121 2.3e-11 72.8 111 38.7
MSTRG.13908 Avicennia marina HOM05D006760 ORTHO05D008121 3.0e-11 72.4 98 42.9
PSO782G3372 Papaver somniferum HOM05D006760 ORTHO05D008121 3.0e-11 72.4 120 40.0
Ca_25094_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 3.9e-11 72.0 101 46.5
Ca_30394_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 3.9e-11 72.0 101 46.5
Migut.E01355 Erythranthe guttata HOM05D006760 ORTHO05D008121 3.9e-11 72.0 98 41.8
PSO063G6156 Papaver somniferum HOM05D006760 ORTHO05D008121 3.9e-11 72.0 120 40.0
unitig_52.g17262 Utricularia gibba HOM05D006760 ORTHO05D008121 3.9e-11 72.0 99 42.4
DCAR_006312 Daucus carota HOM05D006760 ORTHO05D008121 6.6e-11 71.2 96 43.8
AUR62007417 Chenopodium quinoa HOM05D006760 ORTHO05D008121 8.6e-11 70.9 95 41.1
CANSAT21G1082 Cannabis sativa HOM05D006760 ORTHO05D008121 1.1e-10 70.5 98 45.9
Lalb_Chr05g0229401 Lupinus albus HOM05D006760 ORTHO05D008121 1.1e-10 70.5 103 41.7
PGR067G0006 Punica granatum HOM05D006760 ORTHO05D008121 1.1e-10 70.5 90 47.8
ECA246G2456 Erigeron canadensis HOM05D006760 ORTHO05D008121 1.5e-10 70.1 104 37.5
HanXRQChr06g0173431 Helianthus annuus HOM05D006760 ORTHO05D008121 1.5e-10 70.1 88 44.3
Psat2g143640 Pisum sativum HOM05D006760 ORTHO05D008121 1.5e-10 70.1 101 45.5
CDE11G0454 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 1.9e-10 69.7 84 42.9
CDE02G3415 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 3.3e-10 68.9 88 43.2
Lj2g0001135 Lotus japonicus HOM05D006760 ORTHO05D008121 3.3e-10 68.9 100 45.0
AUR62027315 Chenopodium quinoa HOM05D006760 ORTHO05D008121 7.3e-10 67.8 78 44.9
TPR.G17264 Trifolium pratense HOM05D006760 ORTHO05D008121 1.6e-09 66.6 101 41.6
Actinidia01259 Actinidia chinensis HOM05D006760 ORTHO05D008121 2.8e-09 65.9 83 43.4
Actinidia32779 Actinidia chinensis HOM05D006760 ORTHO05D008121 3.6e-09 65.5 101 38.6
arahy.Tifrunner.gnm1.ann1.WT3CQ0 Arachis hypogaea HOM05D006760 ORTHO05D008121 6.2e-09 64.7 95 42.1
arahy.Tifrunner.gnm1.ann1.Z5DNFJ Arachis hypogaea HOM05D006760 ORTHO05D008121 6.2e-09 64.7 95 42.1
Lj8C333T3 Lonicera japonica HOM05D006760 ORTHO05D008121 1.1e-08 63.9 99 40.4
Sc22g0002140 Simmondsia chinensis HOM05D006760 ORTHO05D008121 2.4e-08 62.8 88 44.3
vmacro00052 Vaccinium macrocarpon HOM05D006760 ORTHO05D008121 3.1e-08 62.4 106 39.6
Aqoxy3G00108 Aquilegia oxysepala HOM05D006760 ORTHO05D008121 4.0e-08 62.0 97 42.3
MSTRG.11878 Avicennia marina HOM05D006760 ORTHO05D008121 4.0e-08 62.0 120 37.5
Rhsim11G0034300 Rhododendron simsii HOM05D006760 ORTHO05D008121 2.6e-07 59.3 128 35.9
Zm00001eb064790 Zea mays HOM05D006760 ORTHO05D008121 6.4e-06 54.7 93 38.7
ATR0829G077 Amborella trichopoda HOM05D006760 ORTHO05D008121 8.4e-06 54.3 100 36.0


User provided reference genes

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