Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p32810 Brassica napus HOM05D008776 ORTHO05D005587 2.4e-93 345.5 175 100.0
BolC5t29828H Brassica oleracea HOM05D008776 ORTHO05D005587 2.7e-89 332.0 175 97.1
C05p54830 Brassica napus HOM05D008776 ORTHO05D005587 2.3e-88 328.9 175 96.6
C04p04170 Brassica napus HOM05D008776 ORTHO05D005587 6.7e-88 327.4 175 96.6
BolC4t22056H Brassica oleracea HOM05D008776 ORTHO05D005587 6.7e-88 327.4 175 96.6
BcaC09g49800 Brassica carinata HOM05D008776 ORTHO05D005587 1.2e-76 290.0 182 85.7
BcaC05g25214 Brassica carinata HOM05D008776 ORTHO05D005587 7.0e-61 237.7 122 98.4
BcaC05g29210 Brassica carinata HOM05D008776 ORTHO05D005587 2.5e-58 229.2 121 95.9
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 1.0e-48 197.2 132 84.1
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 7.2e-42 174.5 140 73.6
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.8e-41 172.6 142 73.2
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.4e-40 170.2 141 72.3
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.4e-40 170.2 141 72.3
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.4e-40 170.2 141 72.3
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 6.4e-38 161.4 152 65.1
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 1.4e-37 160.2 147 63.3
CARHR106560 Cardamine hirsuta HOM05D008776 ORTHO05D005587 9.2e-37 157.5 138 65.2
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 1.7e-35 153.3 147 61.2
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 1.7e-35 153.3 147 61.2
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 5.0e-35 151.8 138 63.8
BolC1t03218H Brassica oleracea HOM05D008776 ORTHO05D005587 1.1e-34 150.6 75 97.3
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 2.1e-33 146.4 149 61.7
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 2.1e-33 146.4 144 61.8
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 2.1e-33 146.4 144 61.8
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 2.8e-33 146.0 149 61.7
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 2.3e-32 142.9 145 60.0
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 2.7e-28 129.4 144 59.7
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 4.3e-26 122.1 114 63.2
C09p31770 Brassica napus HOM05D008776 ORTHO05D042895 9.9e-15 84.3 117 45.3
BolC9t56034H Brassica oleracea HOM05D008776 ORTHO05D042895 9.9e-15 84.3 117 45.3
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 9.9e-15 84.3 191 36.6
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.9e-14 82.0 148 41.2
C03p78480 Brassica napus HOM05D032251 ORTHO05D097000 8.6e-11 71.2 45 77.8
BolC1t03288H Brassica oleracea HOM05D032251 ORTHO05D042368 8.6e-11 71.2 45 77.8
BraA08t35093Z Brassica rapa HOM05D000048 ORTHO05D000207 1.6e-09 67.0 56 67.9
C05p21110 Brassica napus HOM05D032251 ORTHO05D042368 2.1e-09 66.6 46 76.1
A08p31710 Brassica napus HOM05D000048 ORTHO05D000207 1.1e-08 64.3 56 66.1
BcaB03g13073 Brassica carinata HOM05D000048 ORTHO05D000207 1.7e-06 57.0 56 60.7
BcaC07g38771 Brassica carinata HOM05D000048 ORTHO05D000207 2.2e-06 56.6 56 62.5
C08p17040 Brassica napus HOM05D000048 ORTHO05D000207 2.2e-06 56.6 56 62.5
Sp1g13490 Schrenkiella parvula HOM05D000048 ORTHO05D000207 4.9e-06 55.5 56 58.9


User provided reference genes

Program Settings