Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p32530 Brassica napus HOM05D001961 ORTHO05D020074 6.3e-64 247.3 126 100.0
BolC1t03189H Brassica oleracea HOM05D001961 ORTHO05D020074 7.0e-63 243.8 126 98.4
BraA01t02491Z Brassica rapa HOM05D001961 ORTHO05D020074 1.9e-52 209.1 115 93.0
BcaC09g49829 Brassica carinata HOM05D001961 ORTHO05D020074 4.1e-39 164.9 87 96.6
BcaB02g10685 Brassica carinata HOM05D001961 ORTHO05D002286 1.1e-36 156.8 167 58.1
Thhalv10010059m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 4.3e-36 154.8 166 56.6
A06p19710 Brassica napus HOM05D001961 ORTHO05D002286 3.6e-35 151.8 155 57.4
A06p19750 Brassica napus HOM05D001961 ORTHO05D002286 3.6e-35 151.8 155 57.4
BraA06t25050Z Brassica rapa HOM05D001961 ORTHO05D002286 3.6e-35 151.8 155 57.4
BraA06t25054Z Brassica rapa HOM05D001961 ORTHO05D002286 3.6e-35 151.8 155 57.4
Thhalv10010060m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 4.7e-35 151.4 166 55.4
AT3G47910 Arabidopsis thaliana HOM05D001961 ORTHO05D002286 1.4e-34 149.8 166 54.8
BcaB05g23091 Brassica carinata HOM05D001961 ORTHO05D002286 1.8e-34 149.4 150 59.3
Sp5g14050 Schrenkiella parvula HOM05D001961 ORTHO05D002286 1.5e-33 146.4 169 55.0
BcaC01g01759 Brassica carinata HOM05D001961 ORTHO05D002286 3.4e-33 145.2 159 54.7
C03p72190 Brassica napus HOM05D001961 ORTHO05D002286 3.4e-33 145.2 159 54.7
BolC3t19515H Brassica oleracea HOM05D001961 ORTHO05D002286 3.4e-33 145.2 159 54.7
Sp5g14040 Schrenkiella parvula HOM05D001961 ORTHO05D002286 1.3e-32 143.3 167 53.3
AT3G47890 Arabidopsis thaliana HOM05D001961 ORTHO05D002286 2.9e-32 142.1 166 53.0
Carub.0005s1404 Capsella rubella HOM05D001961 ORTHO05D002286 3.2e-31 138.7 166 51.8
Carub.0005s1403 Capsella rubella HOM05D001961 ORTHO05D002286 9.2e-31 137.1 159 51.6
AL5G27220 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 1.7e-29 132.9 159 51.6
AL5G27230 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 2.1e-27 125.9 159 50.3
BcaC01g01766 Brassica carinata HOM05D001961 ORTHO05D002286 1.1e-26 123.6 159 49.7
Aa31LG11G1000 Aethionema arabicum HOM05D001961 ORTHO05D002286 9.9e-25 117.1 159 47.8
THA.LOC104821450 Tarenaya hassleriana HOM05D001961 ORTHO05D002286 8.4e-24 114.0 165 47.9
CARHR156630 Cardamine hirsuta HOM05D001961 ORTHO05D002286 1.6e-22 109.8 157 47.8
Aa31LG4G16560 Aethionema arabicum HOM05D001961 ORTHO05D002286 6.6e-21 104.4 151 45.0
CARHR156620 Cardamine hirsuta HOM05D001961 ORTHO05D002286 9.6e-20 100.5 156 44.9
Gohir.A03G064400 Gossypium hirsutum HOM05D001961 ORTHO05D002286 9.6e-20 100.5 149 45.6
Gohir.D03G090700 Gossypium hirsutum HOM05D001961 ORTHO05D002286 3.6e-19 98.6 149 45.0
Gohir.D11G032100 Gossypium hirsutum HOM05D001961 ORTHO05D002286 3.6e-19 98.6 149 43.6
Gorai.003G070500 Gossypium raimondii HOM05D001961 ORTHO05D002286 3.6e-19 98.6 149 45.0
Cfa019014 Carpinus fangiana HOM05D001961 ORTHO05D002286 6.2e-19 97.8 162 42.0
Gohir.A11G028810 Gossypium hirsutum HOM05D001961 ORTHO05D002286 8.1e-19 97.4 149 44.3
Gorai.007G034900 Gossypium raimondii HOM05D001961 ORTHO05D002286 8.1e-19 97.4 149 40.3
Manes.14G073702 Manihot esculenta HOM05D001961 ORTHO05D002286 2.4e-18 95.9 162 40.7
Duzib068G1318 Durio zibethinus HOM05D001961 ORTHO05D002286 3.1e-18 95.5 149 40.9
Atru.chr9.2337 Acer truncatum HOM05D001961 ORTHO05D002286 6.9e-18 94.4 158 41.1
COL.COLO4_35465 Corchorus olitorius HOM05D001961 ORTHO05D002286 6.9e-18 94.4 151 42.4
Haze_07394 Corylus avellana HOM05D001961 ORTHO05D002286 6.9e-18 94.4 162 42.0
Duzib205G1945 Durio zibethinus HOM05D001961 ORTHO05D002286 6.9e-18 94.4 150 40.0
vmacro19421 Vaccinium macrocarpon HOM05D001961 ORTHO05D002286 9.0e-18 94.0 165 38.2
Thecc.03G077100 Theobroma cacao HOM05D001961 ORTHO05D002286 2.0e-17 92.8 149 45.6
Potri.015G066500 Populus trichocarpa HOM05D001961 ORTHO05D002286 3.4e-17 92.0 163 41.1
CsaV3_1G002070 Cucumis sativus L. HOM05D001961 ORTHO05D002286 4.4e-17 91.7 146 41.8
Potri.012G071900 Populus trichocarpa HOM05D001961 ORTHO05D002286 4.4e-17 91.7 163 40.5
MELO3C017148.2 Cucumis melo HOM05D001961 ORTHO05D002286 5.8e-17 91.3 146 43.2
GSVIVG01008079001 Vitis vinifera HOM05D001961 ORTHO05D002286 5.8e-17 91.3 133 44.4
FAN04G1134 Fragaria x ananassa HOM05D001961 ORTHO05D002286 9.9e-17 90.5 145 41.4
Sed0025522 Sechium edule HOM05D001961 ORTHO05D002286 9.9e-17 90.5 159 37.7
Actinidia34975 Actinidia chinensis HOM05D001961 ORTHO05D002286 1.3e-16 90.1 159 38.4
Hma1.2p1_0002F.1_g003390 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 1.3e-16 90.1 149 38.9
TWI15G0443 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 1.3e-16 90.1 69 63.8
Dinv19903 Davidia involucrata HOM05D001961 ORTHO05D002286 1.7e-16 89.7 69 63.8
FAN08G2604 Fragaria x ananassa HOM05D001961 ORTHO05D002286 2.9e-16 89.0 145 40.7
Lj5C117T8 Lonicera japonica HOM05D001961 ORTHO05D002286 2.9e-16 89.0 151 43.0
Dinv38651 Davidia involucrata HOM05D001961 ORTHO05D002286 3.8e-16 88.6 159 36.5
FAN13G0464 Fragaria x ananassa HOM05D001961 ORTHO05D002286 3.8e-16 88.6 146 39.7
Cpa.g.sc17.186 Carica papaya HOM05D001961 ORTHO05D002286 4.9e-16 88.2 69 63.8
Nn4g23006 Nelumbo nucifera HOM05D001961 ORTHO05D002286 6.4e-16 87.8 160 38.1
ClCG06G016460 Citrullus lanatus HOM05D001961 ORTHO05D002286 8.4e-16 87.4 158 41.1
Rhsim08G0161300 Rhododendron simsii HOM05D001961 ORTHO05D002286 1.1e-15 87.0 159 37.7
RcHm_v2.0_Chr7g0180371 Rosa chinensis HOM05D001961 ORTHO05D002286 1.1e-15 87.0 144 41.0
TWI81G0197 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 1.4e-15 86.7 168 38.7
Prupe.5G184600 Prunus persica HOM05D001961 ORTHO05D002286 1.9e-15 86.3 163 39.9
Lalb_Chr12g0201211 Lupinus albus HOM05D001961 ORTHO05D002286 2.4e-15 85.9 162 37.0
A01p25750 Brassica napus HOM05D001961 ORTHO05D020074 3.2e-15 85.5 49 89.8
PSO161G0075 Papaver somniferum HOM05D001961 ORTHO05D002286 3.2e-15 85.5 68 63.2
arahy.Tifrunner.gnm1.ann1.DV6TYS Arachis hypogaea HOM05D001961 ORTHO05D002286 4.2e-15 85.1 167 35.9
CSS0014551 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 5.4e-15 84.7 69 58.0
CSS0045618 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 5.4e-15 84.7 69 58.0
Lj9C457G12 Lonicera japonica HOM05D001961 ORTHO05D002286 5.4e-15 84.7 134 40.3
PSO478G4671 Papaver somniferum HOM05D001961 ORTHO05D002286 5.4e-15 84.7 68 63.2
Actinidia37665 Actinidia chinensis HOM05D001961 ORTHO05D002286 1.2e-14 83.6 159 35.8
MD06G1185800 Malus domestica HOM05D001961 ORTHO05D002286 1.2e-14 83.6 157 40.1
Nn3g17102 Nelumbo nucifera HOM05D001961 ORTHO05D002286 1.2e-14 83.6 159 35.8
Sabra15G0091600 Salix brachista HOM05D001961 ORTHO05D002286 1.2e-14 83.6 163 39.9
TWI60G1556 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 1.2e-14 83.6 69 60.9
Sc04g0002330 Simmondsia chinensis HOM05D001961 ORTHO05D002286 1.6e-14 83.2 149 36.9
Sabra12G0051100 Salix brachista HOM05D001961 ORTHO05D002286 2.7e-14 82.4 165 37.0
arahy.Tifrunner.gnm1.ann1.LMB17M Arachis hypogaea HOM05D001961 ORTHO05D002286 3.5e-14 82.0 98 46.9
SGA_v2.0_scaffold114G31883 Striga asiatica HOM05D001961 ORTHO05D002286 3.5e-14 82.0 66 63.6
MD14G1192000 Malus domestica HOM05D001961 ORTHO05D002286 6.0e-14 81.3 69 63.8
PSO210G7105 Papaver somniferum HOM05D001961 ORTHO05D002286 6.0e-14 81.3 163 39.3
Lalb_Chr13g0298141 Lupinus albus HOM05D001961 ORTHO05D002286 7.9e-14 80.9 91 50.5
TAR374G1240 Trochodendron aralioides HOM05D001961 ORTHO05D002286 7.9e-14 80.9 159 35.8
Ciclev10018472m.g Citrus clementina HOM05D001961 ORTHO05D002286 3.0e-13 79.0 153 38.6
Manes.06G097300 Manihot esculenta HOM05D001961 ORTHO05D002286 3.0e-13 79.0 66 62.1
Peaxi162Scf00009g00524 Petunia axillaris HOM05D001961 ORTHO05D002286 3.0e-13 79.0 154 35.7
Lsat_1_v5_gn_1_11560 Lactuca sativa HOM05D001961 ORTHO05D002286 3.9e-13 78.6 139 40.3
Nitab4.5_0007282g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 3.9e-13 78.6 129 41.9
SGA_v2.0_scaffold7G04090 Striga asiatica HOM05D001961 ORTHO05D002286 3.9e-13 78.6 68 60.3
HPP92_023555 Vanilla planifolia HOM05D001961 ORTHO05D002286 5.1e-13 78.2 148 39.2
Lj1g0021908 Lotus japonicus HOM05D001961 ORTHO05D002286 6.6e-13 77.8 69 56.5
Cc04_g15870 Coffea canephora HOM05D001961 ORTHO05D002286 1.1e-12 77.0 68 54.4
Glyma.17G095800 Glycine max HOM05D001961 ORTHO05D002286 1.1e-12 77.0 67 56.7
Hma1.2p1_0104F.1_g050400 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 1.1e-12 77.0 150 37.3
Lj4g0028007 Lotus japonicus HOM05D001961 ORTHO05D002286 1.5e-12 76.6 69 53.6
Glyma.05G031000 Glycine max HOM05D001961 ORTHO05D002286 2.5e-12 75.9 67 55.2
HanXRQChr05g0155261 Helianthus annuus HOM05D001961 ORTHO05D002286 2.5e-12 75.9 135 42.2
SalBow7G0691 Salvia bowleyana HOM05D001961 ORTHO05D002286 2.5e-12 75.9 67 56.7
MSTRG.11404 Avicennia marina HOM05D001961 ORTHO05D002286 3.3e-12 75.5 161 36.0
MBI01_g01232_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 4.3e-12 75.1 157 33.1
Peaxi162Scf00689g00564 Petunia axillaris HOM05D001961 ORTHO05D002286 4.3e-12 75.1 66 54.5
CAN.G628.49 Capsicum annuum HOM05D001961 ORTHO05D002286 5.6e-12 74.7 66 54.5
Eucgr.B00398 Eucalyptus grandis HOM05D001961 ORTHO05D002286 7.4e-12 74.3 66 56.1
PGSC0003DMG400033067 Solanum tuberosum HOM05D001961 ORTHO05D002286 7.4e-12 74.3 66 53.0
TPR.G38388 Trifolium pratense HOM05D001961 ORTHO05D002286 7.4e-12 74.3 69 53.6
Hund09373 Selenicereus undatus HOM05D001961 ORTHO05D002286 9.6e-12 73.9 150 35.3
Ca_21858_v3 Cicer arietinum L. HOM05D001961 ORTHO05D002286 1.6e-11 73.2 69 52.2
HanXRQChr08g0236941 Helianthus annuus HOM05D001961 ORTHO05D002286 1.6e-11 73.2 132 40.9
Nitab4.5_0000909g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 1.6e-11 73.2 66 56.1
QL10p014874 Quercus lobata HOM05D001961 ORTHO05D002286 1.6e-11 73.2 167 37.1
TAR622G0827 Trochodendron aralioides HOM05D001961 ORTHO05D002286 1.6e-11 73.2 60 58.3
CDE06G2189 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 2.1e-11 72.8 69 55.1
Nitab4.5_0004478g0040 Nicotiana tabacum HOM05D001961 ORTHO05D002286 2.1e-11 72.8 128 39.1
PSO591G0439 Papaver somniferum HOM05D001961 ORTHO05D002286 2.1e-11 72.8 66 54.5
PSO832G1192 Papaver somniferum HOM05D001961 ORTHO05D002286 2.1e-11 72.8 66 54.5
Medtr4g107470 Medicago truncatula HOM05D001961 ORTHO05D002286 2.8e-11 72.4 66 53.0
Nitab4.5_0000003g0050 Nicotiana tabacum HOM05D001961 ORTHO05D002286 2.8e-11 72.4 66 54.5
VMungo1215G0372 Vigna mungo HOM05D001961 ORTHO05D002286 2.8e-11 72.4 91 46.2
AUR62008343 Chenopodium quinoa HOM05D001961 ORTHO05D002286 3.6e-11 72.0 150 35.3
DCAR_021541 Daucus carota HOM05D001961 ORTHO05D002286 3.6e-11 72.0 69 53.6
Hund02679 Selenicereus undatus HOM05D001961 ORTHO05D002286 3.6e-11 72.0 151 35.1
Solyc06g071120.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 4.8e-11 71.6 66 51.5
Sopen06g027420 Solanum pennellii HOM05D001961 ORTHO05D002286 4.8e-11 71.6 66 51.5
PGSC0003DMG400013181 Solanum tuberosum HOM05D001961 ORTHO05D002286 4.8e-11 71.6 129 39.5
Zm00001eb005070 Zea mays HOM05D001961 ORTHO05D002286 4.8e-11 71.6 64 54.7
Psat4g054160 Pisum sativum HOM05D001961 ORTHO05D002286 6.2e-11 71.2 69 50.7
Phvul.003G194200 Phaseolus vulgaris HOM05D001961 ORTHO05D002286 8.1e-11 70.9 158 34.2
Oeu020375.1 Olea europaea HOM05D001961 ORTHO05D002286 1.1e-10 70.5 144 38.2
AUR62021754 Chenopodium quinoa HOM05D001961 ORTHO05D002286 1.4e-10 70.1 149 33.6
Solyc03g113370.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 1.4e-10 70.1 123 36.6
CDE07G1845 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 1.8e-10 69.7 69 52.2
EL10Ac5g10921 Beta vulgaris HOM05D001961 ORTHO05D002286 2.4e-10 69.3 68 47.1
Oeu039544.2 Olea europaea HOM05D001961 ORTHO05D002286 2.4e-10 69.3 132 40.9
PGR083G2262 Punica granatum HOM05D001961 ORTHO05D002286 3.1e-10 68.9 65 50.8
Sopen03g032420 Solanum pennellii HOM05D001961 ORTHO05D002286 3.1e-10 68.9 123 36.6
Ah.02g113120 Amaranthus hybridus HOM05D001961 ORTHO05D002286 4.0e-10 68.6 152 31.6
MBI04_g20664_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 9.0e-10 67.4 98 41.8
FvH4_5g15740 Fragaria vesca HOM05D001961 ORTHO05D002286 1.5e-09 66.6 145 34.5
FAN18G4418 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.5e-09 66.6 145 34.5
SalBow5G1786 Salvia bowleyana HOM05D001961 ORTHO05D002286 3.4e-09 65.5 162 32.7
Lsat_1_v5_gn_5_18460 Lactuca sativa HOM05D001961 ORTHO05D002286 4.5e-09 65.1 69 53.6
Dinv33700 Davidia involucrata HOM05D001961 ORTHO05D002286 7.6e-09 64.3 81 46.9
Migut.I00114 Erythranthe guttata HOM05D001961 ORTHO05D002286 7.6e-09 64.3 156 34.0
CAN.G999.31 Capsicum annuum HOM05D001961 ORTHO05D002286 9.9e-09 63.9 128 37.5
MBI04_g20665_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 1.3e-08 63.5 60 51.7
Zm00001eb403430 Zea mays HOM05D001961 ORTHO05D002286 1.3e-08 63.5 131 34.4
Oeu006173.1 Olea europaea HOM05D001961 ORTHO05D002286 2.2e-08 62.8 150 34.7
Aqoxy3G03236 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 3.8e-08 62.0 158 33.5
CANSAT80G1878 Cannabis sativa HOM05D001961 ORTHO05D002286 3.8e-08 62.0 66 51.5
Oeu006172.1 Olea europaea HOM05D001961 ORTHO05D002286 6.4e-08 61.2 56 51.8
DCAR_026083 Daucus carota HOM05D001961 ORTHO05D002286 8.4e-08 60.8 113 34.5
GSVIVG01032594001 Vitis vinifera HOM05D001961 ORTHO05D010262 3.2e-07 58.9 67 44.8
MBI04_g20669_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 5.5e-07 58.2 157 31.2
Oeu022639.1 Olea europaea HOM05D001961 ORTHO05D002286 7.1e-07 57.8 56 50.0
SEGI_13866 Sequoiadendron giganteum HOM05D001961 ORTHO05D002286 1.2e-06 57.0 70 47.1
unitig_744.g24389 Utricularia gibba HOM05D001961 ORTHO05D002286 1.2e-06 57.0 65 43.1
CSS0004686 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.6e-06 56.6 64 46.9


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