Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.2e-141 506.5 258 100.0
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 4.5e-141 504.6 258 99.6
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.8e-137 492.7 258 97.3
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 5.2e-137 491.1 258 96.9
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.9e-131 472.6 258 93.8
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-112 409.1 208 100.0
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 7.5e-112 407.5 258 82.6
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.1e-110 403.7 259 80.7
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 4.1e-110 401.7 258 81.8
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.5e-109 398.7 258 80.6
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.9e-107 392.9 258 77.9
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.3e-107 392.1 258 78.7
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 4.3e-107 391.7 259 79.5
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 2.7e-101 372.5 208 93.8
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.9e-91 339.7 258 73.3
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-86 323.9 208 79.3
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 6.2e-82 308.1 260 65.4
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.8e-81 306.6 260 64.6
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.1e-81 305.8 260 63.8
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.2e-80 303.9 265 63.8
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-80 303.9 265 64.9
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.2e-80 303.9 260 65.8
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.2e-80 303.9 262 63.4
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 7.6e-80 301.2 262 64.5
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.3e-79 300.4 262 63.4
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-78 297.4 262 64.5
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.4e-78 297.0 262 63.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.4e-78 297.0 262 63.7
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.4e-78 296.2 262 64.1
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-78 295.8 262 62.6
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 3.2e-78 295.8 262 62.6
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-74 283.5 250 63.6
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.4e-73 280.4 250 62.8
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 6.9e-73 278.1 250 62.0
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.2e-72 277.3 260 58.8
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.7e-71 273.5 195 71.3
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.4e-70 269.6 222 62.2
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-70 269.2 251 62.5
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 5.4e-70 268.5 193 68.4
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 9.3e-70 267.7 193 68.4
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 6.0e-69 265.0 196 67.9
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 6.0e-69 265.0 188 69.1
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 6.0e-69 265.0 178 71.9
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.0e-68 264.2 246 56.1
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 1.3e-68 263.8 178 70.8
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.3e-68 263.8 201 64.2
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 1.3e-68 263.8 203 65.0
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 3.0e-68 262.7 193 66.8
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.9e-68 262.3 168 71.4
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 6.6e-68 261.5 203 64.5
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 6.6e-68 261.5 178 69.7
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.5e-67 260.4 178 69.7
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 2.5e-67 259.6 258 52.7
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 4.3e-67 258.8 178 69.1
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 5.6e-67 258.5 238 58.4
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 5.6e-67 258.5 209 70.8
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 9.6e-67 257.7 220 61.4
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 9.6e-67 257.7 203 63.1
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.6e-66 256.9 178 70.2
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.1e-66 256.5 209 61.7
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 2.1e-66 256.5 170 71.8
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 2.8e-66 256.1 178 68.5
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 6.2e-66 255.0 170 71.8
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 6.2e-66 255.0 178 67.4
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.8e-65 253.4 194 63.4
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.8e-65 253.4 197 64.5
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 2.4e-65 253.1 191 64.9
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 2.4e-65 253.1 269 53.5
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.4e-65 253.1 170 70.6
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 3.1e-65 252.7 210 63.8
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 4.0e-65 252.3 191 65.4
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 5.3e-65 251.9 192 63.5
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 5.3e-65 251.9 178 66.3
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 6.9e-65 251.5 236 56.4
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.0e-65 251.1 244 54.9
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.0e-64 250.0 199 64.3
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 2.6e-64 249.6 221 60.6
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 2.6e-64 249.6 212 61.3
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.9e-64 247.7 260 52.7
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.3e-63 247.3 170 69.4
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.9e-63 246.1 193 65.3
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.9e-63 245.4 258 51.6
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 4.9e-63 245.4 184 65.2
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 8.4e-63 244.6 178 66.3
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.4e-62 243.8 258 51.2
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.9e-62 243.4 209 58.9
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-62 243.0 225 64.0
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 5.5e-62 241.9 263 52.5
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 5.5e-62 241.9 265 53.2
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 7.1e-62 241.5 198 63.6
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.6e-61 240.4 166 68.7
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 1.6e-61 240.4 156 73.7
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 2.7e-61 239.6 184 62.5
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 3.5e-61 239.2 177 63.3
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 4.6e-61 238.8 193 62.7
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 2.3e-60 236.5 166 70.5
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 2.3e-60 236.5 178 62.4
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.5e-59 233.0 179 62.0
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 5.6e-59 231.9 178 61.8
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.1e-58 229.9 177 61.0
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 2.8e-58 229.6 247 51.4
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 8.1e-58 228.0 170 63.5
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 3.1e-57 226.1 199 60.8
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 3.1e-57 226.1 192 55.2
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 4.0e-57 225.7 192 58.3
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 4.0e-57 225.7 213 54.0
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 6.9e-57 224.9 197 58.9
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.1e-54 217.6 154 67.5
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.2e-53 214.2 144 70.8
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.7e-53 213.0 160 67.5
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.6e-53 212.2 192 54.2
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 4.6e-53 212.2 260 45.8
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 5.7e-51 205.3 147 68.7
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.1e-49 201.1 177 57.6
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 8.4e-47 191.4 130 70.8
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 3.9e-44 182.6 129 69.8
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 3.3e-43 179.5 128 63.3
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 8.2e-42 174.9 139 58.3
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 2.4e-41 173.3 128 64.1
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 4.5e-40 169.1 155 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 6.5e-39 165.2 197 43.7
BcaC01g01754 Brassica carinata HOM05D005796 ORTHO05D007054 9.7e-35 151.4 114 71.1
C03p72260 Brassica napus HOM05D005796 ORTHO05D007054 9.7e-35 151.4 114 71.1
BolC3t19521H Brassica oleracea HOM05D005796 ORTHO05D007054 9.7e-35 151.4 114 71.1
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.4e-33 147.5 95 75.8
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 6.9e-33 145.2 161 54.7
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 5.0e-31 139.0 141 51.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 5.7e-27 125.6 82 72.0
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.2e-21 107.8 143 42.7
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 8.0e-21 105.1 78 62.8
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 3.7e-18 96.3 183 38.8
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 2.5e-14 83.6 102 45.1
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.6e-13 80.9 152 29.6
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 1.4e-12 77.8 50 68.0
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 9.1e-09 65.1 130 29.2
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 4.5e-08 62.8 69 46.4
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 7.2e-06 55.5 34 70.6


User provided reference genes

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