Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30790 Brassica napus HOM05D064525 ORTHO05D042738 8.6e-72 273.5 132 100.0
BolC1t03011H Brassica oleracea HOM05D064525 ORTHO05D042738 5.6e-71 270.8 132 99.2
Sp2g23080 Schrenkiella parvula HOM05D001081 ORTHO05D004708 1.4e-16 90.1 72 65.3
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 3.3e-15 85.5 62 69.4
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 2.2e-14 82.8 72 61.1
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 8.2e-14 80.9 62 66.1
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.1e-13 79.0 78 55.1
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 2.9e-11 72.4 78 51.3
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 2.9e-11 72.4 66 57.6
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 5.0e-11 71.6 62 56.5
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 1.1e-10 70.5 67 55.2
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 1.1e-10 70.5 67 55.2
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.5e-10 70.1 62 56.5
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.5e-10 70.1 72 51.4
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 1.9e-10 69.7 42 81.0
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 3.2e-10 68.9 62 56.5
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 4.2e-10 68.6 67 53.7
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 4.2e-10 68.6 67 53.7
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 4.2e-10 68.6 67 53.7
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 3.6e-09 65.5 59 66.1
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.0e-08 63.9 62 51.6
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 2.3e-08 62.8 61 54.1
BcaNung01800 Brassica carinata HOM05D001081 ORTHO05D004708 2.3e-08 62.8 61 54.1
BcaB01g02574 Brassica carinata HOM05D001081 ORTHO05D004708 5.2e-08 61.6 61 54.1
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 4.4e-07 58.5 57 52.6
Medtr7g117665 Medicago truncatula HOM05D001081 ORTHO05D003320 7.5e-07 57.8 66 47.0
Glyma.19G256600 Glycine max HOM05D001081 ORTHO05D003320 2.2e-06 56.2 66 45.5
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 2.2e-06 56.2 64 46.9
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 2.2e-06 56.2 97 35.1
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 4.8e-06 55.1 74 43.2
Ca_09514_v3 Cicer arietinum L. HOM05D001081 ORTHO05D003320 6.3e-06 54.7 66 43.9
Ca_30064_v3 Cicer arietinum L. HOM05D001081 ORTHO05D003320 6.3e-06 54.7 66 43.9


User provided reference genes

Program Settings