Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30770 Brassica napus HOM05D008227 ORTHO05D010399 2.2e-102 375.6 178 100.0
BolC1t03010H Brassica oleracea HOM05D008227 ORTHO05D010399 2.5e-82 308.9 169 88.2
Sp3g08190 Schrenkiella parvula HOM05D008227 ORTHO05D010399 1.2e-55 220.3 167 65.3
BcaC09g49957 Brassica carinata HOM05D008227 ORTHO05D010399 2.0e-47 193.0 91 96.7
Thhalv10022358m.g Eutrema salsugineum HOM05D008227 ORTHO05D010399 8.2e-41 171.0 145 57.2
AT3G20620 Arabidopsis thaliana HOM05D008227 ORTHO05D010399 6.9e-40 167.9 166 48.8
AL3G34490 Arabidopsis lyrata HOM05D008227 ORTHO05D010399 2.6e-39 166.0 166 48.8
Carub.0003s2059 Capsella rubella HOM05D008227 ORTHO05D010399 7.6e-39 164.5 163 50.9
Sp3g18620 Schrenkiella parvula HOM05D008227 ORTHO05D010399 1.2e-36 157.1 150 54.0
Carub.0003s2060 Capsella rubella HOM05D008227 ORTHO05D010399 6.0e-36 154.8 175 48.6
AL3G34500 Arabidopsis lyrata HOM05D008227 ORTHO05D010399 8.7e-35 151.0 156 48.7
BcaB06g26093 Brassica carinata HOM05D008227 ORTHO05D010399 1.2e-31 140.6 145 48.3
BcaB06g26127 Brassica carinata HOM05D008227 ORTHO05D010399 1.3e-30 137.1 147 47.6
CARHR096420 Cardamine hirsuta HOM05D008227 ORTHO05D010399 1.4e-29 133.7 136 51.5
Sp3g18660 Schrenkiella parvula HOM05D008227 ORTHO05D010399 1.4e-29 133.7 144 47.2
BraA05t21765Z Brassica rapa HOM05D008227 ORTHO05D010399 1.9e-29 133.3 145 46.9
A05p28890 Brassica napus HOM05D008227 ORTHO05D010399 3.2e-29 132.5 145 46.9
BcaC05g28308 Brassica carinata HOM05D008227 ORTHO05D010399 4.2e-29 132.1 141 48.9
A05p28210 Brassica napus HOM05D008227 ORTHO05D010399 4.2e-29 132.1 147 46.9
A09p39300 Brassica napus HOM05D008227 ORTHO05D010399 4.2e-29 132.1 145 47.6
A05p28200 Brassica napus HOM05D008227 ORTHO05D010399 5.5e-29 131.7 145 46.2
A05p28980 Brassica napus HOM05D008227 ORTHO05D010399 5.5e-29 131.7 145 48.3
BraA05t21701Z Brassica rapa HOM05D008227 ORTHO05D010399 5.5e-29 131.7 145 46.2
C05p43640 Brassica napus HOM05D008227 ORTHO05D010399 2.1e-28 129.8 142 47.2
C05p44400 Brassica napus HOM05D008227 ORTHO05D010399 2.1e-28 129.8 142 47.2
BolC5t33163H Brassica oleracea HOM05D008227 ORTHO05D010399 2.1e-28 129.8 142 47.2
BraA05t21781Z Brassica rapa HOM05D008227 ORTHO05D010399 2.1e-28 129.8 145 46.9
BcaC05g28304 Brassica carinata HOM05D008227 ORTHO05D010399 2.7e-28 129.4 142 47.2
A05p28900 Brassica napus HOM05D008227 ORTHO05D010399 3.6e-28 129.0 147 46.3
BraA05t21766Z Brassica rapa HOM05D008227 ORTHO05D010399 3.6e-28 129.0 147 46.3
C05p43690 Brassica napus HOM05D008227 ORTHO05D010399 1.8e-27 126.7 141 47.5
BraA05t21775Z Brassica rapa HOM05D008227 ORTHO05D010399 3.0e-27 125.9 147 45.6
A05p28220 Brassica napus HOM05D008227 ORTHO05D010399 1.9e-26 123.2 147 46.3
BraA05t21703Z Brassica rapa HOM05D008227 ORTHO05D010399 1.9e-26 123.2 147 46.3
THA.LOC104817886 Tarenaya hassleriana HOM05D008227 ORTHO05D010399 1.9e-21 106.7 138 40.6
Thecc.07G052300 Theobroma cacao HOM05D008227 ORTHO05D010399 2.6e-18 96.3 146 37.0
Gohir.A04G022300 Gossypium hirsutum HOM05D008227 ORTHO05D010399 4.4e-18 95.5 146 39.0
Gorai.009G427100 Gossypium raimondii HOM05D008227 ORTHO05D010399 7.4e-18 94.7 146 39.0
Gohir.D05G365100 Gossypium hirsutum HOM05D008227 ORTHO05D010399 9.7e-18 94.4 146 39.0
FvH4_3g21861 Fragaria vesca HOM05D008227 ORTHO05D010399 1.4e-16 90.5 146 39.0
QL08p013277 Quercus lobata HOM05D008227 ORTHO05D010399 1.8e-16 90.1 146 37.0
Duzib213G0156 Durio zibethinus HOM05D008227 ORTHO05D010399 2.0e-15 86.7 151 35.1
CiPaw.11G183900 Carya illinoinensis HOM05D008227 ORTHO05D010399 2.6e-15 86.3 145 32.4
FAN11G0729 Fragaria x ananassa HOM05D008227 ORTHO05D010399 4.5e-15 85.5 146 37.7
FAN16G2273 Fragaria x ananassa HOM05D008227 ORTHO05D010399 2.9e-14 82.8 156 35.9
RcHm_v2.0_Chr5g0037671 Rosa chinensis HOM05D008227 ORTHO05D010399 5.0e-14 82.0 146 38.4
COL.COLO4_09573 Corchorus olitorius HOM05D008227 ORTHO05D010399 3.2e-13 79.3 147 33.3
Cfa020413 Carpinus fangiana HOM05D008227 ORTHO05D010399 7.2e-13 78.2 134 35.8
FAN25G3354 Fragaria x ananassa HOM05D008227 ORTHO05D010399 8.0e-12 74.7 152 35.5
Haze_09613 Corylus avellana HOM05D008227 ORTHO05D010399 1.0e-11 74.3 133 33.1
Prupe.4G203700 Prunus persica HOM05D008227 ORTHO05D010399 3.9e-11 72.4 134 31.3
GSVIVG01020465001 Vitis vinifera HOM05D008227 ORTHO05D010399 3.9e-11 72.4 154 33.8
TWI39G0949 Tripterygium wilfordii HOM05D008227 ORTHO05D010399 1.5e-10 70.5 144 31.9


User provided reference genes

Program Settings