Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30570 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-50 200.7 95 100.0
BolC3t18710H Brassica oleracea HOM05D001224 ORTHO05D003542 2.6e-46 188.3 96 94.8
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-44 180.3 86 98.8
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-44 180.3 86 98.8
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-44 180.3 86 98.8
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 7.2e-44 180.3 86 98.8
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 7.2e-44 180.3 86 98.8
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-43 179.1 86 97.7
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 1.6e-43 179.1 86 97.7
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-43 178.7 86 97.7
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 2.7e-43 178.3 95 91.6
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-43 177.9 86 97.7
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-43 177.9 86 97.7
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-43 177.9 86 96.5
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 4.6e-43 177.6 86 96.5
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 6.1e-43 177.2 86 97.7
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 6.1e-43 177.2 86 97.7
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 6.1e-43 177.2 86 97.7
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 6.1e-43 177.2 86 97.7
BolC7t45417H Brassica oleracea HOM05D001224 ORTHO05D003542 6.1e-43 177.2 86 97.7
C04p56100 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-43 176.8 86 96.5
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-43 176.8 86 96.5
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-42 176.0 86 97.7
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-42 176.0 86 96.5
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 1.8e-42 175.6 86 96.5
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 1.8e-42 175.6 86 94.2
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-42 174.9 86 95.3
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-42 174.9 86 96.5
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-42 174.9 86 95.3
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-42 174.5 86 95.3
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-42 174.1 86 96.5
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-42 174.1 86 96.5
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-42 174.1 86 96.5
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 5.1e-42 174.1 86 96.5
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 6.7e-42 173.7 86 95.3
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 8.8e-42 173.3 86 96.5
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 8.8e-42 173.3 86 96.5
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-41 172.6 86 93.0
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-41 172.6 86 93.0
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 2.0e-41 172.2 86 94.2
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 4.4e-41 171.0 86 95.3
BraA01t01980Z Brassica rapa HOM05D001224 ORTHO05D003542 3.6e-35 151.4 94 79.8
BcaC05g28435 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-33 145.6 76 90.8
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-32 142.9 67 98.5
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-32 142.9 67 98.5
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-32 142.9 67 98.5
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-32 142.9 67 98.5
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-32 142.9 67 98.5
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-31 139.8 86 74.4
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-31 139.8 66 97.0
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 1.1e-31 139.8 68 94.1
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-31 139.4 68 94.1
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 5.3e-31 137.5 67 94.0
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 7.0e-31 137.1 67 94.0
BcaC02g08298 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-28 129.0 76 82.9
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 4.7e-27 124.4 81 70.4
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-25 119.4 67 86.6
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-25 119.0 86 65.1
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 5.7e-25 117.5 82 68.3
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 5.7e-25 117.5 82 68.3
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 7.5e-25 117.1 86 60.5
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 7.5e-25 117.1 93 58.1
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 7.5e-25 117.1 86 60.5
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 7.5e-25 117.1 93 58.1
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 9.7e-25 116.7 86 62.8
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-24 115.2 82 67.1
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-24 115.2 82 67.1
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 2.8e-24 115.2 82 67.1
BraA10t42920Z Brassica rapa HOM05D001224 ORTHO05D003542 3.7e-24 114.8 82 67.1
BcaB04g17784 Brassica carinata HOM05D001224 ORTHO05D003542 4.8e-24 114.4 86 57.0
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 6.3e-24 114.0 82 65.9
BolC5t31267H Brassica oleracea HOM05D001224 ORTHO05D003542 6.3e-24 114.0 77 63.6
BolC8t49069H Brassica oleracea HOM05D001224 ORTHO05D003542 6.3e-24 114.0 54 100.0
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 6.3e-24 114.0 82 65.9
A03p65910 Brassica napus HOM05D001224 ORTHO05D003542 8.2e-24 113.6 82 65.9
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 8.2e-24 113.6 87 64.4
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 8.2e-24 113.6 79 68.4
BraA03t15645Z Brassica rapa HOM05D001224 ORTHO05D003542 8.2e-24 113.6 82 65.9
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-23 112.8 79 67.1
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-23 112.8 79 67.1
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-23 112.8 82 65.9
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-23 112.8 82 64.6
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-23 112.8 82 64.6
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 1.8e-23 112.5 79 67.1
C05p25300 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-23 112.5 77 63.6
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 1.8e-23 112.5 82 65.9
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-23 112.1 82 65.9
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-23 112.1 82 65.9
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-23 112.1 82 65.9
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-23 112.1 93 55.9
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 2.4e-23 112.1 82 65.9
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-23 111.7 82 64.6
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 3.1e-23 111.7 79 67.1
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 4.1e-23 111.3 86 61.6
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 4.1e-23 111.3 78 67.9
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 4.1e-23 111.3 78 67.9
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-23 110.9 82 65.9
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-23 110.9 82 64.6
BolC6t37489H Brassica oleracea HOM05D001224 ORTHO05D003542 5.3e-23 110.9 54 96.3
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 5.3e-23 110.9 82 63.4
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 7.0e-23 110.5 93 55.9
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 7.0e-23 110.5 82 64.6
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 9.1e-23 110.2 82 65.9
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-22 109.8 82 64.6
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 1.2e-22 109.8 82 64.6
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-22 109.4 79 67.1
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-22 109.4 79 65.8
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-22 109.0 52 96.2
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-22 109.0 82 64.6
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-22 108.6 82 63.4
C01p38780 Brassica napus HOM05D001224 ORTHO05D003542 3.5e-22 108.2 93 55.9
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 3.5e-22 108.2 79 65.8
BolC1t03835H Brassica oleracea HOM05D001224 ORTHO05D003542 3.5e-22 108.2 93 55.9
BolC2t09958H Brassica oleracea HOM05D001224 ORTHO05D003542 4.5e-22 107.8 93 53.8
C02p39450 Brassica napus HOM05D001224 ORTHO05D003542 5.9e-22 107.5 93 53.8
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 7.7e-22 107.1 82 62.2
BcaB07g32746 Brassica carinata HOM05D001224 ORTHO05D003542 1.0e-21 106.7 92 48.9
BcaC06g36232 Brassica carinata HOM05D001224 ORTHO05D003542 1.0e-21 106.7 86 55.8
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-21 106.7 52 94.2
C07p06200 Brassica napus HOM05D001224 ORTHO05D003542 1.0e-21 106.7 86 55.8
BolC7t41037H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-21 106.3 86 57.0
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-21 105.9 82 62.2
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 2.9e-21 105.1 79 64.6
BcaB04g18313 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-20 102.4 48 97.9
BcaC06g36118 Brassica carinata HOM05D001224 ORTHO05D003542 9.4e-20 100.1 83 59.0
BolC7t41181H Brassica oleracea HOM05D001224 ORTHO05D003542 9.4e-20 100.1 83 59.0
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-19 99.8 86 55.8
BcaC01g01871 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-18 96.3 86 53.5
BcaC02g11931 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-17 93.2 86 52.3
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-17 92.8 66 68.2
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-17 92.8 75 61.3
BolC4t22584H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-17 92.8 83 53.0
BraA03t15646Z Brassica rapa HOM05D001224 ORTHO05D003542 1.5e-17 92.8 44 100.0
A01p26690 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-17 92.4 92 52.2
BcaC05g26485 Brassica carinata HOM05D001224 ORTHO05D003542 3.4e-17 91.7 83 50.6
C07p07600 Brassica napus HOM05D001224 ORTHO05D003542 5.7e-17 90.9 83 55.4
BcaB06g26818 Brassica carinata HOM05D001224 ORTHO05D003542 2.8e-16 88.6 46 89.1
BolC4t23825H Brassica oleracea HOM05D001224 ORTHO05D003542 2.8e-16 88.6 70 54.3
BraA02t07130Z Brassica rapa HOM05D001224 ORTHO05D003542 2.8e-16 88.6 86 48.8
BcaC01g03079 Brassica carinata HOM05D001224 ORTHO05D003542 4.8e-16 87.8 56 76.8
BcaC06g36233 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-15 86.3 73 52.1
C07p13950 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-15 85.9 60 63.3
C03p71050 Brassica napus HOM05D001224 ORTHO05D003542 4.1e-15 84.7 79 48.1
BolC3t19388H Brassica oleracea HOM05D001224 ORTHO05D003542 4.1e-15 84.7 79 48.1
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 5.4e-15 84.3 82 53.7
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 9.1e-15 83.6 63 63.5
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 2.7e-14 82.0 82 52.4
BcaNung05284 Brassica carinata HOM05D001224 ORTHO05D003542 2.9e-13 78.6 69 52.2
BcaB07g33138 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-12 75.9 54 59.3
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-11 73.2 52 71.2
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-09 65.5 30 96.7
A04p11170 Brassica napus HOM05D001224 ORTHO05D023838 4.4e-09 64.7 51 52.9
BraA04t16781Z Brassica rapa HOM05D001224 ORTHO05D023838 7.5e-09 63.9 51 54.9
C05p25310 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-08 63.2 51 51.0
BolC3t17910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-08 63.2 30 93.3
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-08 62.4 81 42.0
C03p69250 Brassica napus HOM05D001224 ORTHO05D003542 4.1e-07 58.2 50 54.0
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 7.0e-07 57.4 37 67.6
BcaC06g33589 Brassica carinata HOM05D002776 ORTHO05D003542 1.2e-06 56.6 37 75.7
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 4.5e-06 54.7 35 62.9
BolC3t18884H Brassica oleracea HOM05D001224 ORTHO05D003542 5.9e-06 54.3 40 57.5


User provided reference genes

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