Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 0.0e+00 1426.0 717 100.0
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 0.0e+00 1359.0 714 96.6
BcaC09g50012 Brassica carinata HOM05D004375 ORTHO05D016090 3.5e-284 981.5 714 75.5
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 3.0e-86 323.9 804 33.5
BolC2t07404H Brassica oleracea HOM05D020498 ORTHO05D027565 2.9e-81 307.4 763 33.8
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 2.1e-42 178.3 743 26.1
C01p33560 Brassica napus HOM05D020498 ORTHO05D016090 5.2e-38 163.7 203 45.3
BcaC03g14060 Brassica carinata HOM05D004375 ORTHO05D024058 9.9e-29 132.9 141 53.2
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-25 122.5 181 34.8
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 7.3e-24 116.7 774 24.8
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 2.8e-23 114.8 789 22.1
BolC9t57116H Brassica oleracea HOM05D020498 ORTHO05D016090 3.6e-23 114.4 151 45.0
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 4.0e-22 110.9 777 22.9
BcaC09g49739 Brassica carinata HOM05D004375 ORTHO05D008558 4.0e-22 110.9 182 34.6
C02p28420 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-21 109.4 745 23.8
BraA01t02896Z Brassica rapa HOM05D020498 ORTHO05D016090 1.5e-21 109.0 147 41.5
A09p17280 Brassica napus HOM05D004375 ORTHO05D008558 2.0e-21 108.6 180 32.2
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 7.6e-21 106.7 794 23.6
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 9.9e-21 106.3 745 22.1
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 9.9e-21 106.3 184 32.6
A10p10580 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-20 105.5 770 26.1
A02p26110 Brassica napus HOM05D004375 ORTHO05D008558 2.2e-20 105.1 184 33.2
A02p20030 Brassica napus HOM05D004375 ORTHO05D008558 2.9e-20 104.8 184 32.6
A03p68120 Brassica napus HOM05D004375 ORTHO05D008558 6.4e-20 103.6 180 31.1
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-19 102.4 749 23.1
C01p14310 Brassica napus HOM05D004375 ORTHO05D008558 1.4e-19 102.4 180 30.0
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 3.2e-19 101.3 743 24.0
BcaB04g17136 Brassica carinata HOM05D004375 ORTHO05D008558 4.2e-19 100.9 181 33.1
A01p20690 Brassica napus HOM05D004375 ORTHO05D008558 4.2e-19 100.9 169 32.0
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-18 99.0 178 30.3
BcaC04g20539 Brassica carinata HOM05D030300 ORTHO05D032481 2.1e-18 98.6 387 31.0
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-18 98.6 802 22.6
BcaB07g32958 Brassica carinata HOM05D004375 ORTHO05D008558 7.9e-18 96.7 246 26.0
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 7.9e-18 96.7 185 29.7
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 7.9e-18 96.7 178 29.8
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-17 95.9 749 23.0
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-17 95.9 764 22.0
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 2.3e-17 95.1 793 21.9
BcaC03g15172 Brassica carinata HOM05D004375 ORTHO05D008558 3.0e-17 94.7 175 30.3
BcaB04g18137 Brassica carinata HOM05D030300 ORTHO05D016090 8.7e-17 93.2 71 57.7
C09p42380 Brassica napus HOM05D004375 ORTHO05D027565 1.5e-16 92.4 87 59.8
BolC9t57118H Brassica oleracea HOM05D004375 ORTHO05D027565 1.5e-16 92.4 87 59.8
C09p42370 Brassica napus HOM05D030300 ORTHO05D032481 1.9e-16 92.0 118 43.2
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 5.6e-16 90.5 772 23.3
BcaB05g23325 Brassica carinata HOM05D004375 ORTHO05D008558 7.4e-16 90.1 133 33.8
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 9.6e-16 89.7 95 47.4
BolC1t03301H Brassica oleracea HOM05D020498 ORTHO05D016090 9.6e-16 89.7 89 50.6
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 1.6e-15 89.0 95 45.3
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 8.1e-15 86.7 778 21.3
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-14 86.3 745 23.0
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-14 85.1 824 22.3
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.0e-14 84.3 216 28.2
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 6.9e-14 83.6 178 30.9
C02p27470 Brassica napus HOM05D004375 ORTHO05D008558 9.0e-14 83.2 772 21.8
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-13 82.0 788 23.4
BcaB05g24368 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-13 81.6 129 33.3
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.8e-13 80.5 191 28.8
BcaB02g10812 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-12 79.7 747 21.2
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-12 79.0 708 22.7
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 4.9e-12 77.4 816 22.2
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 6.5e-12 77.0 769 22.9
BcaC03g15253 Brassica carinata HOM05D004375 ORTHO05D008558 8.4e-12 76.6 180 25.0
BcaB02g09193 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-11 76.3 166 31.9
BraA01t02895Z Brassica rapa HOM05D029054 ORTHO05D024058 1.4e-11 75.9 139 36.7
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-11 75.5 803 22.2
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.2e-11 74.7 184 28.3
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.5e-11 73.9 183 27.9
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.1e-10 72.0 172 32.0
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 2.7e-10 71.6 167 35.3
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 3.5e-10 71.2 184 30.4
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-09 69.3 183 25.1
C06p03140 Brassica napus HOM05D004375 ORTHO05D016039 1.3e-09 69.3 156 35.3
BolC6t35432H Brassica oleracea HOM05D004375 ORTHO05D016039 1.3e-09 69.3 156 35.3
C01p25780 Brassica napus HOM05D004375 ORTHO05D008558 1.8e-09 68.9 116 31.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.3e-09 68.6 135 31.9
BcaB05g21622 Brassica carinata HOM05D004375 ORTHO05D008558 3.0e-09 68.2 178 28.1
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 3.9e-09 67.8 152 24.3
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.1e-09 67.4 199 25.1
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 6.7e-09 67.0 127 30.7
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 1.9e-08 65.5 131 30.5
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 1.9e-08 65.5 155 26.5
Carub.0008s0715 Capsella rubella HOM05D000675 ORTHO05D000395 3.3e-08 64.7 163 24.5
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 5.7e-08 63.9 236 23.7
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 7.4e-08 63.5 172 25.0
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 9.6e-08 63.2 112 29.5
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-07 62.8 178 24.7
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 1.6e-07 62.4 136 30.1
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 2.8e-07 61.6 131 29.8
AL2G29150 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 3.7e-07 61.2 181 23.8
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 3.7e-07 61.2 202 23.8
AL5G38970 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 3.7e-07 61.2 181 23.8
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 6.3e-07 60.5 131 29.0
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-07 60.1 172 24.4
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.1e-06 59.7 314 22.0
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.4e-06 59.3 230 24.3
BcaB05g23104 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-06 58.9 116 32.8
BolC1t02734H Brassica oleracea HOM05D004375 ORTHO05D008558 2.4e-06 58.5 114 32.5
BraA02t08415Z Brassica rapa HOM05D000675 ORTHO05D003044 2.4e-06 58.5 112 25.0
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.1e-06 57.8 184 23.9
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 4.1e-06 57.8 764 21.7
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 4.1e-06 57.8 145 25.5
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 4.1e-06 57.8 119 25.2
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 4.1e-06 57.8 145 25.5
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-06 57.4 178 24.2
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-06 57.4 183 27.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 5.3e-06 57.4 194 27.3
SpUn0394_0010 Schrenkiella parvula HOM05D011834 ORTHO05D013625 5.3e-06 57.4 61 45.9
Aa31LG1G3610 Aethionema arabicum HOM05D001285 ORTHO05D000199 6.9e-06 57.0 236 22.5
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 6.9e-06 57.0 236 22.5
Aa31LG6G12780 Aethionema arabicum HOM05D001285 ORTHO05D000199 6.9e-06 57.0 236 22.5
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 6.9e-06 57.0 178 28.7
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 9.0e-06 56.6 176 21.0
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 9.0e-06 56.6 148 26.4


User provided reference genes

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