Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50044 Brassica carinata HOM05D011235 ORTHO05D012940 1.4e-94 349.7 192 100.0
C01p29650 Brassica napus HOM05D011235 ORTHO05D012940 1.4e-94 349.7 192 100.0
BolC1t02907H Brassica oleracea HOM05D011235 ORTHO05D012940 1.4e-94 349.7 192 100.0
BraA01t02308Z Brassica rapa HOM05D011235 ORTHO05D012940 1.3e-89 333.2 192 96.4
Sp5g11610 Schrenkiella parvula HOM05D011235 ORTHO05D012940 2.0e-69 266.2 164 79.3
A09p43630 Brassica napus HOM05D011235 ORTHO05D012940 3.8e-68 261.9 166 75.9
BcaC07g39521 Brassica carinata HOM05D011235 ORTHO05D012940 4.9e-68 261.5 166 75.9
C08p25660 Brassica napus HOM05D011235 ORTHO05D012940 2.5e-67 259.2 166 74.7
BraA09t39824Z Brassica rapa HOM05D011235 ORTHO05D012940 7.1e-67 257.7 166 75.3
AT3G50610 Arabidopsis thaliana HOM05D011235 ORTHO05D012940 2.6e-61 239.2 244 60.2
AL5G30750 Arabidopsis lyrata HOM05D011235 ORTHO05D012940 1.8e-57 226.5 232 59.9
BcaB01g00606 Brassica carinata HOM05D011235 ORTHO05D012940 2.3e-57 226.1 242 59.5
Carub.0005s1692 Capsella rubella HOM05D011235 ORTHO05D012940 8.8e-57 224.2 166 68.7
CARHR160110 Cardamine hirsuta HOM05D011235 ORTHO05D012940 2.2e-55 219.5 240 56.7
Thhalv10010927m.g Eutrema salsugineum HOM05D011235 ORTHO05D012940 7.2e-51 204.5 220 60.5
Aa31LG4G18770 Aethionema arabicum HOM05D011235 ORTHO05D012940 9.7e-48 194.1 166 58.4
C07p24950 Brassica napus HOM05D011153 ORTHO05D013195 2.9e-07 59.7 125 39.2
BolC7t43025H Brassica oleracea HOM05D011153 ORTHO05D013195 2.9e-07 59.7 125 39.2
BcaC06g34752 Brassica carinata HOM05D011153 ORTHO05D013195 6.4e-07 58.5 125 38.4
A07p17090 Brassica napus HOM05D011153 ORTHO05D013195 8.3e-07 58.2 54 59.3
BraA07t29436Z Brassica rapa HOM05D011153 ORTHO05D013195 8.3e-07 58.2 54 59.3
Thhalv10005479m.g Eutrema salsugineum HOM05D011153 ORTHO05D013195 3.2e-06 56.2 45 60.0


User provided reference genes

Program Settings