Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 8.6e-56 219.9 100 100.0
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 5.6e-55 217.2 100 99.0
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 1.6e-49 199.1 102 90.2
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 1.6e-49 199.1 102 90.2
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 5.4e-42 174.1 106 79.2
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 5.4e-42 174.1 106 79.2
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 5.4e-42 174.1 105 80.0
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 9.2e-42 173.3 106 78.3
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 6.0e-41 170.6 106 77.4
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 1.1e-39 166.4 104 77.9
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 1.1e-39 166.4 100 77.0
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 1.9e-34 149.1 107 71.0
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 5.4e-26 120.9 119 60.5
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 1.7e-19 99.4 97 53.6
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 2.2e-19 99.0 113 47.8
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 3.8e-19 98.2 96 53.1
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 8.4e-19 97.1 97 52.6
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 1.2e-17 93.2 104 51.0
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 1.6e-17 92.8 105 47.6
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 2.7e-17 92.0 97 52.6
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 2.7e-17 92.0 97 51.5
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 3.5e-17 91.7 104 47.1
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.5e-17 91.7 107 48.6
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 6.0e-17 90.9 98 51.0
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.0e-16 90.1 108 47.2
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 1.0e-16 90.1 108 47.2
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.8e-16 89.4 104 49.0
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 2.3e-16 89.0 104 49.0
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.3e-16 89.0 104 49.0
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.3e-16 89.0 104 49.0
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 3.9e-16 88.2 99 48.5
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 3.9e-16 88.2 97 49.5
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 3.9e-16 88.2 101 48.5
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 5.1e-16 87.8 96 49.0
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 5.1e-16 87.8 92 50.0
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 3.3e-15 85.1 90 47.8
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 9.6e-15 83.6 102 45.1
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.3e-14 83.2 89 48.3
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 1.3e-14 83.2 89 48.3
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 1.6e-14 82.8 85 49.4
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 2.1e-14 82.4 97 46.4
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 3.7e-14 81.6 106 44.3
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 3.7e-14 81.6 106 44.3
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 3.7e-14 81.6 92 51.1
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.7e-14 81.6 88 47.7
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 3.7e-14 81.6 96 47.9
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 4.8e-14 81.3 99 44.4
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 6.2e-14 80.9 102 43.1
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 6.2e-14 80.9 103 43.7
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 1.1e-13 80.1 122 41.0
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 1.1e-13 80.1 97 42.3
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 1.1e-13 80.1 85 45.9
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 1.4e-13 79.7 85 51.8
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 1.4e-13 79.7 108 42.6
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 1.8e-13 79.3 94 45.7
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 1.8e-13 79.3 91 42.9
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 1.8e-13 79.3 97 42.3
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 1.8e-13 79.3 94 44.7
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 2.4e-13 79.0 97 42.3
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 3.1e-13 78.6 90 43.3
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 4.0e-13 78.2 94 43.6
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 6.9e-13 77.4 97 46.4
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 6.9e-13 77.4 97 46.4
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 1.2e-12 76.6 76 51.3
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 1.2e-12 76.6 109 39.4
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 2.0e-12 75.9 76 51.3
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 2.0e-12 75.9 76 50.0
BolC7t45147H Brassica oleracea HOM05D007821 ORTHO05D009897 2.6e-12 75.5 45 75.6
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 5.8e-12 74.3 87 41.4
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 2.9e-11 72.0 97 43.3
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 2.9e-11 72.0 93 45.2
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 8.4e-11 70.5 78 46.2
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 8.4e-11 70.5 105 39.0
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 1.1e-10 70.1 77 46.8
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 1.1e-10 70.1 91 40.7
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 1.1e-10 70.1 88 42.0
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 1.9e-10 69.3 91 41.8
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 2.5e-10 68.9 89 37.1
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 3.2e-10 68.6 78 46.2
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 3.2e-10 68.6 78 46.2
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 4.2e-10 68.2 89 38.2
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 5.5e-10 67.8 97 42.3
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 1.2e-09 66.6 127 34.6
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.7e-09 65.5 83 48.2
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 1.5e-07 59.7 111 34.2
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 1.3e-06 56.6 93 38.7


User provided reference genes

Program Settings