Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.7e-91 339.3 172 100.0
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.7e-91 339.3 172 100.0
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 7.8e-89 330.5 172 98.3
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 7.8e-89 330.5 172 98.3
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 2.1e-78 295.8 174 87.9
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 6.4e-75 284.3 184 83.7
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 6.4e-75 284.3 177 85.3
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.1e-74 283.5 178 84.8
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 5.1e-72 274.6 182 81.3
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 5.1e-72 274.6 182 81.3
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.2e-70 270.0 174 80.5
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.2e-70 270.0 181 80.1
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 3.6e-70 268.5 175 82.3
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.4e-69 266.5 182 80.2
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.8e-69 266.2 175 81.1
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.3e-67 260.0 138 97.1
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.1e-49 199.5 155 65.8
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.7e-49 199.1 155 65.8
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 4.6e-49 198.4 169 63.9
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.3e-48 196.8 138 71.0
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.8e-48 196.4 130 74.6
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 6.7e-48 194.5 151 67.5
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 6.7e-48 194.5 135 71.9
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 8.7e-48 194.1 129 76.0
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.5e-47 193.4 133 73.7
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.5e-47 193.4 143 71.3
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.9e-47 193.0 129 75.2
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.9e-47 193.0 132 75.0
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 2.5e-47 192.6 148 64.2
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 7.4e-47 191.0 148 66.9
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.3e-46 190.3 132 69.7
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 2.8e-46 189.1 177 58.8
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 2.8e-46 189.1 154 65.6
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 4.8e-46 188.3 146 67.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 4.8e-46 188.3 147 64.6
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 4.8e-46 188.3 138 70.3
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 8.1e-46 187.6 117 77.8
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 8.1e-46 187.6 136 71.3
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 8.1e-46 187.6 182 58.8
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 8.1e-46 187.6 139 66.9
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.1e-45 187.2 148 65.5
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.4e-45 186.8 135 69.6
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.4e-45 186.8 189 56.6
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.4e-45 186.8 129 75.2
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.8e-45 186.4 154 63.6
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 2.4e-45 186.0 135 71.9
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 3.1e-45 185.7 130 71.5
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 4.0e-45 185.3 137 69.3
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 4.0e-45 185.3 162 63.0
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 4.0e-45 185.3 129 70.5
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 6.9e-45 184.5 177 59.3
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 9.0e-45 184.1 163 60.7
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 9.0e-45 184.1 145 67.6
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 1.5e-44 183.3 144 66.0
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 2.0e-44 183.0 150 63.3
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 2.6e-44 182.6 140 67.9
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.6e-44 182.6 136 69.9
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.6e-44 182.6 132 72.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.5e-44 181.8 138 68.8
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.5e-44 181.8 138 68.1
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 4.5e-44 181.8 125 72.0
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.3e-43 180.3 119 73.9
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 2.2e-43 179.5 138 65.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.9e-43 179.1 130 68.5
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.9e-43 179.1 119 72.3
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 4.9e-43 178.3 161 59.0
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 8.4e-43 177.6 136 66.9
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.1e-42 177.2 183 55.7
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.4e-42 176.8 109 75.2
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.9e-42 176.4 109 78.0
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 3.2e-42 175.6 134 68.7
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 3.2e-42 175.6 138 66.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.1e-42 174.5 148 64.9
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.1e-42 174.5 148 64.9
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 9.3e-42 174.1 132 70.5
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 9.3e-42 174.1 135 68.9
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-41 173.7 132 70.5
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-41 173.7 132 70.5
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 1.6e-41 173.3 131 70.2
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.1e-41 172.9 128 70.3
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 3.5e-41 172.2 136 66.9
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 4.6e-41 171.8 117 74.4
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.0e-40 170.6 132 64.4
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.0e-40 170.6 126 64.3
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.3e-40 170.2 106 79.2
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.3e-40 170.2 138 64.5
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.8e-40 169.9 134 66.4
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.8e-40 169.9 138 64.5
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 3.0e-40 169.1 134 65.7
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 3.9e-40 168.7 138 63.8
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 6.7e-40 167.9 109 77.1
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 1.1e-39 167.2 175 53.7
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.9e-39 166.4 109 73.4
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 4.3e-39 165.2 109 75.2
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 7.4e-39 164.5 128 65.6
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.3e-38 163.7 148 62.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 2.1e-38 162.9 122 63.9
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 2.1e-38 162.9 122 63.9
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.4e-37 160.2 141 61.7
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 6.9e-37 157.9 138 60.9
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 7.6e-36 154.5 170 50.0
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.3e-35 153.7 113 71.7
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 2.9e-35 152.5 129 61.2
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 8.4e-35 151.0 118 68.6
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 2.5e-34 149.4 132 61.4
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.2e-33 147.1 86 80.2
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.1e-33 146.4 94 76.6
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.1e-33 146.4 121 63.6
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 3.0e-32 142.5 106 67.9
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.5e-31 140.2 109 59.6
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 4.3e-31 138.7 114 63.2
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.7e-30 135.6 97 70.1
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 4.8e-30 135.2 130 55.4
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.1e-29 134.0 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.3e-29 131.7 123 51.2
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.0e-28 129.8 116 62.9
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 7.2e-26 121.3 114 58.8
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 7.2e-26 121.3 123 47.2
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.6e-25 120.2 116 49.1
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 8.8e-16 87.8 98 45.9
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 7.4e-15 84.7 122 39.3
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.0e-12 76.6 76 50.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.7e-08 61.6 61 50.8
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 4.4e-07 58.9 81 45.7


User provided reference genes

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