Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p28730 Brassica napus HOM05D019133 ORTHO05D020186 9.2e-37 156.4 79 100.0
BolC1t02800H Brassica oleracea HOM05D019133 ORTHO05D020186 6.0e-36 153.7 79 98.7
BolC3t17128H Brassica oleracea HOM05D019133 ORTHO05D020186 1.0e-35 152.9 79 97.5
C09p52090 Brassica napus HOM05D019133 ORTHO05D020186 2.0e-31 138.7 79 92.4
C03p48510 Brassica napus HOM05D019133 ORTHO05D020186 8.7e-27 123.2 62 98.4
BolC9t58074H Brassica oleracea HOM05D019133 ORTHO05D020186 6.2e-25 117.1 63 92.1
BraA08t32162Z Brassica rapa HOM05D019133 ORTHO05D020186 2.8e-17 91.7 50 90.0
BcaB05g22113 Brassica carinata HOM05D002523 ORTHO05D002951 7.1e-13 77.0 73 60.3
AL8G29250 Arabidopsis lyrata HOM05D002523 ORTHO05D002951 9.3e-13 76.6 73 58.9
Thhalv10013580m.g Eutrema salsugineum HOM05D002523 ORTHO05D002951 9.3e-13 76.6 73 58.9
Sp6g16150 Schrenkiella parvula HOM05D002523 ORTHO05D002951 9.3e-13 76.6 73 58.9
AT5G54130 Arabidopsis thaliana HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
BcaC03g14326 Brassica carinata HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
A02p10550 Brassica napus HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
C02p17610 Brassica napus HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
BolC2t07892H Brassica oleracea HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
BraA02t06119Z Brassica rapa HOM05D002523 ORTHO05D002951 3.5e-12 74.7 73 57.5
Aa31LG3G9910 Aethionema arabicum HOM05D002523 ORTHO05D002951 4.6e-12 74.3 73 57.5
Carub.0008s1442 Capsella rubella HOM05D002523 ORTHO05D002951 4.6e-12 74.3 73 56.2
BcaB08g35762 Brassica carinata HOM05D002523 ORTHO05D002951 1.3e-11 72.8 72 56.9
C09p44240 Brassica napus HOM05D002523 ORTHO05D002951 1.3e-11 72.8 72 56.9
BcaC04g20384 Brassica carinata HOM05D002523 ORTHO05D002951 5.1e-11 70.9 72 55.6
A10p11410 Brassica napus HOM05D002523 ORTHO05D002951 5.1e-11 70.9 72 55.6
BolC9t57297H Brassica oleracea HOM05D002523 ORTHO05D002951 5.1e-11 70.9 72 55.6
BraA10t43235Z Brassica rapa HOM05D002523 ORTHO05D002951 5.1e-11 70.9 72 55.6
THA.LOC104825163 Tarenaya hassleriana HOM05D002523 ORTHO05D002951 8.1e-09 63.5 78 46.2
THA.LOC104799939 Tarenaya hassleriana HOM05D002523 ORTHO05D002951 1.1e-08 63.2 80 45.0
MELO3C024866.2 Cucumis melo HOM05D002523 ORTHO05D002951 1.8e-08 62.4 74 45.9
CsaV3_4G008700 Cucumis sativus L. HOM05D002523 ORTHO05D002951 1.8e-08 62.4 73 46.6
Gohir.A11G102500 Gossypium hirsutum HOM05D002523 ORTHO05D002951 5.3e-08 60.8 75 40.0
Gohir.D11G107000 Gossypium hirsutum HOM05D002523 ORTHO05D002951 5.3e-08 60.8 75 40.0
Gorai.007G114600 Gossypium raimondii HOM05D002523 ORTHO05D002951 5.3e-08 60.8 75 40.0
ClCG07G009670 Citrullus lanatus HOM05D002523 ORTHO05D002951 1.2e-07 59.7 73 43.8
Cpa.g.sc3.171 Carica papaya HOM05D002523 ORTHO05D002951 1.5e-07 59.3 77 42.9
Sed0017970 Sechium edule HOM05D002523 ORTHO05D002951 1.5e-07 59.3 73 45.2
GSVIVG01038668001 Vitis vinifera HOM05D002523 ORTHO05D002951 1.5e-07 59.3 78 44.9
Prupe.2G320700 Prunus persica HOM05D002523 ORTHO05D002951 2.0e-07 58.9 76 44.7
FAN01G3084 Fragaria x ananassa HOM05D002523 ORTHO05D002951 3.4e-07 58.2 71 46.5
TPR.G35917 Trifolium pratense HOM05D002523 ORTHO05D002951 3.4e-07 58.2 72 47.2
FvH4_7g33080 Fragaria vesca HOM05D002523 ORTHO05D002951 4.5e-07 57.8 71 46.5
FAN03G0988 Fragaria x ananassa HOM05D002523 ORTHO05D002951 4.5e-07 57.8 72 45.8
FAN10G1524 Fragaria x ananassa HOM05D002523 ORTHO05D002951 4.5e-07 57.8 71 46.5
FAN10G3000 Fragaria x ananassa HOM05D002523 ORTHO05D002951 4.5e-07 57.8 71 46.5
Potri.012G007600 Populus trichocarpa HOM05D002523 ORTHO05D002951 4.5e-07 57.8 75 42.7
Psat5g070800 Pisum sativum HOM05D002523 ORTHO05D002951 7.6e-07 57.0 77 42.9
Glyma.04G226800 Glycine max HOM05D002523 ORTHO05D002951 9.9e-07 56.6 76 43.4
Lalb_Chr08g0239491 Lupinus albus HOM05D002523 ORTHO05D002951 9.9e-07 56.6 90 40.0
Sabra15G0002700 Salix brachista HOM05D002523 ORTHO05D002951 9.9e-07 56.6 74 43.2
vmacro06458 Vaccinium macrocarpon HOM05D002523 ORTHO05D002951 9.9e-07 56.6 76 43.4
RcHm_v2.0_Chr1g0383111 Rosa chinensis HOM05D002523 ORTHO05D002951 1.3e-06 56.2 71 42.3
Lj1g0021654 Lotus japonicus HOM05D002523 ORTHO05D002951 1.7e-06 55.8 73 45.2
Potri.015G004200 Populus trichocarpa HOM05D002523 ORTHO05D002951 2.2e-06 55.5 76 42.1
CSS0049255 Camellia sinensis var. sinensis HOM05D002523 ORTHO05D002951 2.9e-06 55.1 77 45.5
Glyma.06G138200 Glycine max HOM05D002523 ORTHO05D002951 2.9e-06 55.1 76 43.4
QL09p006507 Quercus lobata HOM05D002523 ORTHO05D002951 2.9e-06 55.1 72 48.6
Rhsim03G0217100 Rhododendron simsii HOM05D002523 ORTHO05D002951 2.9e-06 55.1 76 46.1
SGA_v2.0_scaffold1362G53926 Striga asiatica HOM05D002523 ORTHO05D002951 2.9e-06 55.1 92 38.0
TWI39G0415 Tripterygium wilfordii HOM05D002523 ORTHO05D002951 2.9e-06 55.1 77 44.2
Hma1.2p1_0115F.1_g055610 Hydrangea macrophylla HOM05D002523 ORTHO05D002951 3.8e-06 54.7 78 42.3
Lalb_Chr11g0067501 Lupinus albus HOM05D002523 ORTHO05D002951 4.9e-06 54.3 76 42.1
Hund09728 Selenicereus undatus HOM05D002523 ORTHO05D002951 4.9e-06 54.3 89 41.6
SGA_v2.0_scaffold18G08481 Striga asiatica HOM05D002523 ORTHO05D002951 4.9e-06 54.3 88 38.6
Actinidia34279 Actinidia chinensis HOM05D002523 ORTHO05D002951 6.4e-06 53.9 79 39.2
Nn1g00472 Nelumbo nucifera HOM05D002523 ORTHO05D002951 6.4e-06 53.9 78 38.5
CSS0009553 Camellia sinensis var. sinensis HOM05D002523 ORTHO05D002951 8.4e-06 53.5 60 46.7
Ca_16793_v3 Cicer arietinum L. HOM05D002523 ORTHO05D002951 8.4e-06 53.5 77 42.9
Ca_16809_v3 Cicer arietinum L. HOM05D002523 ORTHO05D002951 8.4e-06 53.5 77 42.9


User provided reference genes

Program Settings