Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p28440 Brassica napus HOM05D004643 ORTHO05D005535 2.8e-194 681.8 347 100.0
BolC1t02783H Brassica oleracea HOM05D004643 ORTHO05D005535 1.4e-190 669.5 348 98.9
A01p22960 Brassica napus HOM05D004643 ORTHO05D005535 1.1e-177 626.7 351 93.2
BcaC09g50142 Brassica carinata HOM05D004643 ORTHO05D005535 8.7e-172 607.1 313 99.0
BraA01t02209Z Brassica rapa HOM05D004643 ORTHO05D005535 3.4e-168 595.1 321 95.6
BcaNung00344 Brassica carinata HOM05D004643 ORTHO05D005535 6.7e-156 554.3 317 89.6
Sp7g12820 Schrenkiella parvula HOM05D004643 ORTHO05D005535 1.0e-140 503.8 320 83.8
Thhalv10025735m.g Eutrema salsugineum HOM05D004643 ORTHO05D005535 1.9e-134 483.0 322 80.4
AT4G14720 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 6.3e-130 468.0 320 78.8
BcaB04g18255 Brassica carinata HOM05D004643 ORTHO05D005535 8.5e-127 457.6 317 79.5
Carub.0007s2745 Capsella rubella HOM05D004643 ORTHO05D005535 8.5e-127 457.6 316 78.5
BolC8t48230H Brassica oleracea HOM05D004643 ORTHO05D005535 3.3e-123 445.7 317 78.9
CARHR221190 Cardamine hirsuta HOM05D004643 ORTHO05D005535 3.3e-123 445.7 319 76.5
A08p11380 Brassica napus HOM05D004643 ORTHO05D005535 8.2e-122 441.0 341 75.1
BraA08t33131Z Brassica rapa HOM05D004643 ORTHO05D005535 2.6e-120 436.0 317 77.6
BcaC07g37843 Brassica carinata HOM05D004643 ORTHO05D005535 6.5e-119 431.4 343 72.9
AL7G41265 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 7.2e-118 427.9 317 75.4
Carub.0007s2747 Capsella rubella HOM05D004643 ORTHO05D005535 1.5e-115 420.2 311 75.6
AL7G41240 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 2.4e-113 412.9 316 73.1
AT4G14713 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 1.4e-92 344.0 227 76.7
THA.LOC104803050 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 3.7e-90 335.9 337 58.8
Aa31LG9G2640 Aethionema arabicum HOM05D004643 ORTHO05D005535 4.6e-88 328.9 337 59.1
THA.LOC104808573 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 9.2e-81 304.7 348 52.9
Thecc.04G238200 Theobroma cacao HOM05D004643 ORTHO05D005535 9.3e-65 251.5 355 46.8
CARHR221170 Cardamine hirsuta HOM05D004643 ORTHO05D005535 3.3e-62 243.0 311 53.1
Manes.15G032500 Manihot esculenta HOM05D004643 ORTHO05D005535 5.3e-60 235.7 340 45.3
Haze_11230 Corylus avellana HOM05D004643 ORTHO05D005535 7.6e-59 231.9 339 44.2
CsaV3_2G013410 Cucumis sativus L. HOM05D004643 ORTHO05D005535 1.3e-58 231.1 338 44.7
Duzib151G1159 Durio zibethinus HOM05D004643 ORTHO05D005535 3.2e-57 226.5 358 45.3
Prupe.1G020900 Prunus persica HOM05D004643 ORTHO05D005535 7.1e-57 225.3 357 44.5
CiPaw.02G121300 Carya illinoinensis HOM05D004643 ORTHO05D005535 2.1e-56 223.8 331 45.9
MD16G1199200 Malus domestica HOM05D004643 ORTHO05D005535 4.6e-56 222.6 347 44.4
Cpa.g.sc44.119 Carica papaya HOM05D004643 ORTHO05D005535 6.0e-56 222.2 304 47.4
ClCG06G006490 Citrullus lanatus HOM05D004643 ORTHO05D005535 3.9e-55 219.5 317 45.4
Ciclev10005357m.g Citrus clementina HOM05D004643 ORTHO05D005535 6.6e-55 218.8 350 43.4
Sed0027490 Sechium edule HOM05D004643 ORTHO05D005535 1.5e-54 217.6 337 42.7
Sed0024780 Sechium edule HOM05D004643 ORTHO05D005535 3.3e-54 216.5 273 48.0
GSVIVG01018038001 Vitis vinifera HOM05D004643 ORTHO05D005535 4.3e-54 216.1 323 45.2
RcHm_v2.0_Chr4g0387691 Rosa chinensis HOM05D004643 ORTHO05D005535 3.6e-53 213.0 330 43.6
QL06p001136 Quercus lobata HOM05D004643 ORTHO05D005535 3.1e-52 209.9 359 42.1
MD13G1199500 Malus domestica HOM05D004643 ORTHO05D005535 6.9e-52 208.8 349 43.3
CANSAT78G2233 Cannabis sativa HOM05D004643 ORTHO05D005535 9.0e-52 208.4 333 43.8
COL.COLO4_21561 Corchorus olitorius HOM05D004643 ORTHO05D005535 2.0e-51 207.2 304 45.7
Gorai.011G168900 Gossypium raimondii HOM05D004643 ORTHO05D005535 4.5e-51 206.1 361 43.2
FAN12G4007 Fragaria x ananassa HOM05D004643 ORTHO05D005535 7.6e-51 205.3 342 42.4
Gohir.D10G151600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 2.2e-50 203.8 360 43.3
FvH4_4g01120 Fragaria vesca HOM05D004643 ORTHO05D005535 3.8e-50 203.0 342 42.1
Manes.03G173500 Manihot esculenta HOM05D004643 ORTHO05D005535 4.9e-50 202.6 269 46.1
Gohir.A10G113842 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.9e-49 200.7 361 42.4
VMungo0720G0668 Vigna mungo HOM05D004643 ORTHO05D005535 3.2e-49 199.9 335 41.2
Atru.chr4.2372 Acer truncatum HOM05D004643 ORTHO05D005535 5.4e-49 199.1 338 42.9
Nn6g34159 Nelumbo nucifera HOM05D004643 ORTHO05D005535 9.3e-49 198.4 355 41.4
FAN22G0811 Fragaria x ananassa HOM05D002305 ORTHO05D002528 1.6e-48 197.6 269 45.4
Atru.chr4.2396 Acer truncatum HOM05D004643 ORTHO05D005535 2.1e-48 197.2 338 42.6
Lj5g0008364 Lotus japonicus HOM05D004643 ORTHO05D005535 2.1e-48 197.2 336 41.1
FAN17G1992 Fragaria x ananassa HOM05D002305 ORTHO05D002528 1.0e-47 194.9 329 41.9
TWI53G0950 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 3.0e-47 193.4 340 40.0
Phvul.007G061400 Phaseolus vulgaris HOM05D004643 ORTHO05D005535 3.9e-47 193.0 334 40.7
Eucgr.H03414 Eucalyptus grandis HOM05D004643 ORTHO05D005535 5.1e-47 192.6 274 45.6
TPR.G26097 Trifolium pratense HOM05D004643 ORTHO05D005535 1.1e-46 191.4 321 41.1
TAR362G0460 Trochodendron aralioides HOM05D004643 ORTHO05D005535 4.3e-46 189.5 336 42.6
Glyma.10G244400 Glycine max HOM05D004643 ORTHO05D005535 5.6e-46 189.1 336 40.5
Psat6g204360 Pisum sativum HOM05D004643 ORTHO05D005535 5.6e-46 189.1 275 43.3
Medtr1g102900 Medicago truncatula HOM05D004643 ORTHO05D005535 9.6e-46 188.3 339 39.8
MELO3C014283.2 Cucumis melo HOM05D004643 ORTHO05D005535 2.8e-45 186.8 338 39.6
Dinv22507 Davidia involucrata HOM05D004643 ORTHO05D005535 4.8e-45 186.0 336 41.4
Glyma.20G150000 Glycine max HOM05D004643 ORTHO05D005535 6.2e-45 185.7 338 39.1
Ciclev10021137m.g Citrus clementina HOM05D004643 ORTHO05D005535 1.4e-44 184.5 289 43.3
Ca_10855_v3 Cicer arietinum L. HOM05D004643 ORTHO05D005535 4.0e-44 183.0 339 40.1
Nn1g02445 Nelumbo nucifera HOM05D004643 ORTHO05D005535 4.0e-44 183.0 270 44.4
PGR004G2239 Punica granatum HOM05D004643 ORTHO05D005535 4.0e-44 183.0 352 39.5
PSO170G0554 Papaver somniferum HOM05D004643 ORTHO05D005535 9.0e-44 181.8 279 43.7
AUR62024080 Chenopodium quinoa HOM05D004643 ORTHO05D005535 3.4e-43 179.9 326 41.4
AUR62034685 Chenopodium quinoa HOM05D004643 ORTHO05D005535 4.5e-43 179.5 332 39.8
PSO210G1486 Papaver somniferum HOM05D004643 ORTHO05D005535 2.2e-42 177.2 282 43.3
CSS0031620 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 1.1e-41 174.9 316 39.2
Hma1.2p1_0172F.1_g075970 Hydrangea macrophylla HOM05D004643 ORTHO05D005535 1.1e-41 174.9 331 38.4
MBI11_g22675_MAGBIO Magnolia biondii HOM05D004643 ORTHO05D005535 1.1e-41 174.9 348 38.8
Lalb_Chr21g0304771 Lupinus albus HOM05D004643 ORTHO05D005535 1.4e-41 174.5 275 44.0
Actinidia19959 Actinidia chinensis HOM05D004643 ORTHO05D005535 4.2e-41 172.9 333 39.0
GSVIVG01003113001 Vitis vinifera HOM05D004643 ORTHO05D005535 4.2e-41 172.9 341 40.2
DCAR_002706 Daucus carota HOM05D004643 ORTHO05D005535 7.1e-41 172.2 330 39.4
Lsat_1_v5_gn_5_185821 Lactuca sativa HOM05D004643 ORTHO05D005535 1.6e-40 171.0 271 41.0
Gorai.004G077100 Gossypium raimondii HOM05D004643 ORTHO05D005535 3.5e-40 169.9 296 40.2
Gohir.A12G002900 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.0e-39 168.3 300 40.7
Solyc09g065630.3 Solanum lycopersicum HOM05D004643 ORTHO05D005535 1.0e-39 168.3 284 41.2
Aqoxy5G00405 Aquilegia oxysepala HOM05D004643 ORTHO05D005535 1.8e-39 167.5 344 36.6
Potri.005G214300 Populus trichocarpa HOM05D004643 ORTHO05D005535 2.3e-39 167.2 348 35.6
Duzib133G1145 Durio zibethinus HOM05D004643 ORTHO05D005535 3.0e-39 166.8 271 41.7
Migut.N02031 Erythranthe guttata HOM05D004643 ORTHO05D005535 3.0e-39 166.8 296 39.5
Sopen09g027380 Solanum pennellii HOM05D004643 ORTHO05D005535 3.9e-39 166.4 332 38.3
Migut.O00727 Erythranthe guttata HOM05D004643 ORTHO05D005535 6.7e-39 165.6 306 38.2
CAN.G380.10 Capsicum annuum HOM05D004643 ORTHO05D005535 1.5e-38 164.5 275 40.0
Gorai.008G002400 Gossypium raimondii HOM05D004643 ORTHO05D005535 1.5e-38 164.5 346 37.6
Potri.002G048500 Populus trichocarpa HOM05D004643 ORTHO05D005535 1.9e-38 164.1 342 36.0
Dinv32890 Davidia involucrata HOM05D004643 ORTHO05D005535 4.3e-38 162.9 187 50.3
HanXRQChr11g0338851 Helianthus annuus HOM05D004643 ORTHO05D005535 4.3e-38 162.9 274 41.2
MSTRG.21530 Avicennia marina HOM05D004643 ORTHO05D005535 5.7e-38 162.5 289 39.4
TAR636G3033 Trochodendron aralioides HOM05D004643 ORTHO05D005535 7.4e-38 162.2 354 37.3
Thecc.01G272300 Theobroma cacao HOM05D004643 ORTHO05D005535 1.3e-37 161.4 298 39.3
Atru.chr5.1514 Acer truncatum HOM05D004643 ORTHO05D005535 4.8e-37 159.5 352 36.6
PGSC0003DMG400019346 Solanum tuberosum HOM05D004643 ORTHO05D005535 6.2e-37 159.1 284 39.8
SalBow4G2540 Salvia bowleyana HOM05D004643 ORTHO05D005535 1.1e-36 158.3 267 39.7
Duzib211G0433 Durio zibethinus HOM05D004643 ORTHO05D005535 1.4e-36 157.9 299 39.5
HanXRQChr01g0005571 Helianthus annuus HOM05D004643 ORTHO05D005535 1.4e-36 157.9 286 40.2
TWI73G0832 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 2.4e-36 157.1 209 47.8
Gohir.A08G064300 Gossypium hirsutum HOM05D004643 ORTHO05D005535 3.1e-36 156.8 274 40.5
Gohir.D12G002600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 6.9e-36 155.6 344 37.2
Actinidia09108 Actinidia chinensis HOM05D004643 ORTHO05D005535 9.0e-36 155.2 290 40.0
Peaxi162Scf00230g00029 Petunia axillaris HOM05D004643 ORTHO05D005535 9.0e-36 155.2 281 39.9
Cc01_g19060 Coffea canephora HOM05D004643 ORTHO05D005535 1.2e-35 154.8 296 38.2
ECA248G3352 Erigeron canadensis HOM05D004643 ORTHO05D005535 1.2e-35 154.8 295 37.6
Duzib138G1309 Durio zibethinus HOM05D004643 ORTHO05D005535 2.0e-35 154.1 299 39.5
CAN.G771.7 Capsicum annuum HOM05D004643 ORTHO05D005535 5.8e-35 152.5 282 41.1
Nitab4.5_0015056g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 1.3e-34 151.4 286 39.5
Sabra05G0163800 Salix brachista HOM05D004643 ORTHO05D005535 1.3e-34 151.4 315 35.2
SGA_v2.0_scaffold138G35301 Striga asiatica HOM05D004643 ORTHO05D005535 1.3e-34 151.4 346 36.1
EL10Ac3g06512 Beta vulgaris HOM05D004643 ORTHO05D005535 1.7e-34 151.0 188 47.3
Nitab4.5_0001044g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 5.0e-34 149.4 287 38.7
Solyc06g084120.4 Solanum lycopersicum HOM05D004643 ORTHO05D005535 6.5e-34 149.1 277 40.1
unitig_0.g136 Utricularia gibba HOM05D004643 ORTHO05D005535 6.5e-34 149.1 298 36.6
Nitab4.5_0000252g0230 Nicotiana tabacum HOM05D004643 ORTHO05D005535 8.4e-34 148.7 279 38.4
Nitab4.5_0000871g0020 Nicotiana tabacum HOM05D004643 ORTHO05D005535 1.1e-33 148.3 264 38.3
PGSC0003DMG401020059 Solanum tuberosum HOM05D004643 ORTHO05D005535 1.9e-33 147.5 335 36.7
CDE10G0665 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 2.5e-33 147.1 276 37.3
Lsat_1_v5_gn_8_94021 Lactuca sativa HOM05D004643 ORTHO05D005535 4.2e-33 146.4 291 39.5
MSTRG.18264 Avicennia marina HOM05D004643 ORTHO05D005535 5.5e-33 146.0 196 44.9
SGA_v2.0_scaffold1G00527 Striga asiatica HOM05D004643 ORTHO05D005535 5.5e-33 146.0 263 38.4
HPP92_023542 Vanilla planifolia HOM05D004643 ORTHO05D005535 7.1e-33 145.6 305 37.7
Ah.00g000940 Amaranthus hybridus HOM05D004643 ORTHO05D005535 1.2e-32 144.8 209 45.5
Manes.05G081400 Manihot esculenta HOM05D004643 ORTHO05D005535 3.5e-32 143.3 193 46.6
Sopen06g035500 Solanum pennellii HOM05D004643 ORTHO05D005535 1.3e-31 141.4 262 38.2
CDE10G0709 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 1.5e-27 127.9 285 35.1
Rhsim13G0028400 Rhododendron simsii HOM05D004643 ORTHO05D005535 3.8e-26 123.2 411 29.4
Sabra02G0039600 Salix brachista HOM05D004643 ORTHO05D005535 5.5e-25 119.4 330 34.2
ATR0665G494 Amborella trichopoda HOM05D004643 ORTHO05D005535 7.9e-24 115.5 287 32.8
CiPaw.01G195600 Carya illinoinensis HOM05D004643 ORTHO05D005535 7.9e-24 115.5 231 38.1
Gohir.D08G072800 Gossypium hirsutum HOM05D004643 ORTHO05D005535 7.9e-24 115.5 274 35.0
Lj2C1166G12 Lonicera japonica HOM05D004643 ORTHO05D005535 7.9e-24 115.5 295 34.6
SHI00517 Sapria himalayana HOM05D004643 ORTHO05D005535 1.4e-23 114.8 246 34.1
SMO356G0236 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 1.5e-22 111.3 172 40.1
BcaC07g37844 Brassica carinata HOM05D004643 ORTHO05D005535 7.4e-22 109.0 94 68.1
Ah.11g047360 Amaranthus hybridus HOM05D004643 ORTHO05D005535 2.2e-21 107.5 91 60.4
SEGI_27968 Sequoiadendron giganteum HOM05D004643 ORTHO05D005535 4.1e-20 103.2 312 33.7
Sc13g0004740 Simmondsia chinensis HOM05D004643 ORTHO05D005535 5.3e-20 102.8 215 35.3
Hund22704 Selenicereus undatus HOM05D004643 ORTHO05D005535 1.0e-18 98.6 114 48.2
SMO348G0038 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 6.5e-18 95.9 270 32.2
unitig_60.g25785 Utricularia gibba HOM05D004643 ORTHO05D005535 6.5e-18 95.9 288 30.6
TAR365G0093 Trochodendron aralioides HOM05D001497 ORTHO05D001707 9.4e-17 92.0 239 36.0
SMO153G0002 Selaginella moellendorffii HOM05D004643 ORTHO05D005535 1.6e-16 91.3 270 30.4
Peaxi162Scf00608g00922 Petunia axillaris HOM05D004643 ORTHO05D005535 4.7e-16 89.7 232 33.6
Oeu047217.1 Olea europaea HOM05D004643 ORTHO05D005535 1.4e-15 88.2 121 45.5
Oeu047218.1 Olea europaea HOM05D004643 ORTHO05D005535 3.1e-12 77.0 141 36.9
CBR_g49108 Chara braunii HOM05D000004 ORTHO05D038404 1.2e-11 75.1 56 62.5
COL.COLO4_09197 Corchorus olitorius HOM05D004643 ORTHO05D005535 8.0e-08 62.4 90 42.2
vmacro02609 Vaccinium macrocarpon HOM05D004643 ORTHO05D005535 6.7e-07 59.3 196 31.6
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 5.7e-06 56.2 61 42.6
PSO724G1109 Papaver somniferum HOM05D001047 ORTHO05D000768 5.7e-06 56.2 110 37.3
Gohir.A01G148700 Gossypium hirsutum HOM05D002346 ORTHO05D002452 7.5e-06 55.8 65 40.0


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