Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p28360 Brassica napus HOM05D009142 ORTHO05D040187 5.6e-121 437.6 213 100.0
BolC1t02765H Brassica oleracea HOM05D009142 ORTHO05D040187 8.1e-104 380.6 196 96.4
BolC3t19224H Brassica oleracea HOM05D009142 ORTHO05D017515 5.7e-57 224.9 208 62.5
BolC3t19232H Brassica oleracea HOM05D009142 ORTHO05D106603 1.7e-53 213.4 162 72.8
C09p28950 Brassica napus HOM05D009142 ORTHO05D097323 1.6e-51 206.8 223 59.2
C03p69660 Brassica napus HOM05D009142 ORTHO05D017515 2.9e-45 186.0 189 59.3
BolC9t55760H Brassica oleracea HOM05D009142 ORTHO05D017515 3.2e-44 182.6 146 70.5
C02p23170 Brassica napus HOM05D009142 ORTHO05D017515 6.1e-43 178.3 184 58.7
C01p32780 Brassica napus HOM05D009142 ORTHO05D017515 8.0e-43 177.9 189 58.7
BcaC04g21679 Brassica carinata HOM05D009142 ORTHO05D090460 2.8e-40 169.5 146 67.8
BolC2t08459H Brassica oleracea HOM05D009142 ORTHO05D106632 6.3e-40 168.3 208 52.9
BcaC01g01996 Brassica carinata HOM05D009142 ORTHO05D017515 1.1e-39 167.5 146 66.4
BcaC01g02001 Brassica carinata HOM05D009142 ORTHO05D017515 3.1e-39 166.0 146 65.8
C03p69730 Brassica napus HOM05D009142 ORTHO05D017515 2.0e-38 163.3 146 65.1
C04p24200 Brassica napus HOM05D009142 ORTHO05D097994 4.5e-38 162.2 107 79.4
C08p06560 Brassica napus HOM05D009142 ORTHO05D017515 8.8e-34 147.9 174 55.2
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 2.6e-33 146.4 137 63.5
BolC1t01877H Brassica oleracea HOM05D009142 ORTHO05D105623 5.6e-28 128.6 196 43.9
BcaC09g49802 Brassica carinata HOM05D009142 ORTHO05D091049 4.7e-27 125.6 148 53.4
C03p63120 Brassica napus HOM05D009142 ORTHO05D041944 2.3e-13 80.1 35 97.1
BolC1t03216H Brassica oleracea HOM05D009142 ORTHO05D106828 2.8e-11 73.2 35 85.7
BcaC01g02590 Brassica carinata HOM05D012155 ORTHO05D021780 2.9e-08 63.2 58 60.3
BcaC09g50894 Brassica carinata HOM05D009142 ORTHO05D095404 4.9e-08 62.4 107 45.8
BcaC06g33515 Brassica carinata HOM05D009142 ORTHO05D027516 2.4e-07 60.1 145 37.9
C07p48260 Brassica napus HOM05D009142 ORTHO05D027516 2.4e-07 60.1 145 37.9
BcaB04g18378 Brassica carinata HOM05D001202 ORTHO05D001728 4.1e-07 59.3 32 84.4
BolC8t47502H Brassica oleracea HOM05D009142 ORTHO05D041800 7.1e-07 58.5 28 82.1
BcaC07g37978 Brassica carinata HOM05D001202 ORTHO05D001728 9.2e-07 58.2 32 81.2
A08p12270 Brassica napus HOM05D001202 ORTHO05D001728 9.2e-07 58.2 32 81.2
BraA08t33231Z Brassica rapa HOM05D001202 ORTHO05D001728 9.2e-07 58.2 32 81.2
C08p08840 Brassica napus HOM05D009142 ORTHO05D032415 2.1e-06 57.0 54 64.8
BolC8t47730H Brassica oleracea HOM05D009142 ORTHO05D032415 2.1e-06 57.0 54 64.8
BcaC07g37407 Brassica carinata HOM05D009142 ORTHO05D032415 3.5e-06 56.2 50 66.0
BolC8t48360H Brassica oleracea HOM05D001202 ORTHO05D001728 4.6e-06 55.8 32 78.1
C03p63110 Brassica napus HOM05D009142 ORTHO05D101793 7.8e-06 55.1 81 50.6


User provided reference genes

Program Settings