Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 1.2e-265 919.5 549 100.0
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-236 823.2 595 86.4
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 5.7e-202 708.0 606 77.7
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-198 697.2 543 82.5
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 4.0e-195 685.3 636 70.4
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 1.3e-193 680.2 683 70.1
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 6.1e-188 661.4 602 74.9
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 4.5e-183 645.2 631 70.5
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 3.5e-175 619.0 616 65.9
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 2.8e-148 529.6 597 67.8
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 8.4e-137 491.5 505 66.5
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 7.9e-135 485.0 532 68.8
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 1.5e-133 480.7 526 63.5
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 4.8e-132 475.7 571 64.3
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 6.2e-124 448.7 599 54.8
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 9.3e-120 434.9 637 51.0
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-116 424.5 436 62.8
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 4.1e-115 419.5 471 63.3
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 7.7e-114 415.2 604 52.6
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 1.3e-105 387.9 386 61.7
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 2.2e-100 370.5 419 65.9
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 4.1e-99 366.3 526 46.8
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 5.7e-93 345.9 492 50.2
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 7.4e-93 345.5 397 59.7
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-92 343.6 344 64.8
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 9.4e-88 328.6 503 51.9
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 4.7e-87 326.2 321 74.8
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 6.1e-87 325.9 308 64.6
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 2.3e-86 323.9 323 61.3
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 9.8e-85 318.5 299 68.6
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 1.6e-82 311.2 477 51.4
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 2.0e-82 310.8 483 52.4
C05p49980 Brassica napus HOM05D003348 ORTHO05D011028 2.7e-82 310.5 407 58.7
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-81 307.8 303 66.3
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 7.2e-80 302.4 501 50.9
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 7.2e-80 302.4 237 81.9
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-79 301.6 436 48.9
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 2.1e-79 300.8 379 60.4
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 3.6e-79 300.1 527 49.0
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-77 295.0 436 49.5
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 3.7e-76 290.0 304 75.3
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-74 284.3 297 60.6
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 5.9e-74 282.7 459 46.4
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 2.3e-70 270.8 380 57.9
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 2.6e-69 267.3 275 65.1
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-68 263.8 423 45.6
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 6.3e-68 262.7 255 76.5
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-67 260.8 437 45.3
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 5.9e-66 256.1 421 46.1
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-64 251.1 224 64.3
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 2.0e-61 241.1 199 68.3
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 4.4e-61 240.0 396 43.4
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-57 228.8 363 56.7
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 3.9e-57 226.9 181 69.1
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 5.0e-57 226.5 269 58.7
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 5.6e-56 223.0 424 40.6
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 2.3e-54 217.6 421 41.3
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-53 214.9 201 61.2
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 2.6e-53 214.2 157 75.2
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 4.9e-52 209.9 379 43.0
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-50 204.9 363 48.8
BraA05t21731Z Brassica rapa HOM05D003348 ORTHO05D011028 2.1e-50 204.5 127 81.9
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 1.0e-49 202.2 284 60.9
A04p00790 Brassica napus HOM05D003348 ORTHO05D011028 2.3e-49 201.1 127 81.1
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-48 198.4 343 42.0
A04p08250 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-44 184.1 120 79.2
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 3.7e-44 183.7 138 74.6
C05p50020 Brassica napus HOM05D003348 ORTHO05D009907 6.4e-44 183.0 199 69.3
BolC7t40724H Brassica oleracea HOM05D003348 ORTHO05D011028 1.7e-41 174.9 114 78.9
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 1.9e-40 171.4 176 82.4
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 3.3e-40 170.6 96 91.7
A09p49020 Brassica napus HOM05D003348 ORTHO05D011028 4.7e-39 166.8 110 80.0
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 8.1e-39 166.0 98 89.8
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 1.1e-38 165.6 98 87.8
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-38 165.2 164 60.4
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 3.1e-38 164.1 112 88.4
C06p33300 Brassica napus HOM05D006890 ORTHO05D009907 4.0e-38 163.7 197 67.0
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-37 162.2 239 53.1
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 4.9e-36 156.8 116 73.3
BolC9t58934H Brassica oleracea HOM05D003348 ORTHO05D013252 1.4e-35 155.2 329 35.0
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 5.4e-35 153.3 127 90.6
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 1.3e-33 148.7 140 60.0
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 3.0e-33 147.5 340 50.9
C09p53280 Brassica napus HOM05D003348 ORTHO05D011028 2.5e-32 144.4 211 57.8
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 5.6e-32 143.3 353 38.8
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 5.6e-32 143.3 84 86.9
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 2.8e-31 141.0 84 85.7
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 4.8e-31 140.2 82 91.5
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 8.1e-31 139.4 86 83.7
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 8.1e-31 139.4 86 83.7
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 8.1e-31 139.4 170 50.0
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 5.8e-29 133.3 234 53.8
BolC9t54115H Brassica oleracea HOM05D003348 ORTHO05D013252 2.9e-28 131.0 238 45.8
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-27 129.0 116 57.8
BolC8t47243H Brassica oleracea HOM05D003348 ORTHO05D011028 1.1e-27 129.0 115 55.7
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 1.4e-27 128.6 107 67.3
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 3.5e-26 124.0 128 57.8
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 4.6e-26 123.6 229 47.2
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 2.5e-24 117.9 77 79.2
A01p32740 Brassica napus HOM05D003348 ORTHO05D039563 2.5e-24 117.9 95 82.1
BolC7t40802H Brassica oleracea HOM05D003348 ORTHO05D011028 3.1e-22 110.9 130 50.8
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 4.5e-21 107.1 61 91.8
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 4.5e-21 107.1 61 91.8
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 4.9e-20 103.6 165 41.8
C03p79880 Brassica napus HOM05D003348 ORTHO05D013252 8.4e-20 102.8 182 46.7
A01p32730 Brassica napus HOM05D003348 ORTHO05D011028 3.5e-18 97.4 57 86.0
A05p28540 Brassica napus HOM05D003348 ORTHO05D011028 3.5e-18 97.4 57 86.0
A09p62240 Brassica napus HOM05D003348 ORTHO05D011028 3.5e-18 97.4 57 86.0
BolC9t58202H Brassica oleracea HOM05D003348 ORTHO05D011028 6.0e-18 96.7 205 48.3
BolC3t20240H Brassica oleracea HOM05D003348 ORTHO05D013252 1.5e-16 92.0 66 57.6
A02p34430 Brassica napus HOM05D003348 ORTHO05D033085 1.3e-15 89.0 98 50.0
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-15 88.6 108 52.8
A07p02290 Brassica napus HOM05D003348 ORTHO05D033085 2.8e-15 87.8 98 49.0
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 4.8e-15 87.0 77 63.6
BolC2t10873H Brassica oleracea HOM05D003348 ORTHO05D011028 3.8e-12 77.4 237 41.8
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.9e-12 77.0 140 27.9
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 4.9e-12 77.0 41 90.2
Carub.0001s3341 Capsella rubella HOM05D003348 ORTHO05D011028 4.9e-12 77.0 176 28.4
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 3.2e-11 74.3 144 28.5
Aa31LG9G5280 Aethionema arabicum HOM05D003348 ORTHO05D010016 4.2e-11 73.9 121 33.9
Carub.0001s3404 Capsella rubella HOM05D003348 ORTHO05D000395 2.7e-10 71.2 171 27.5
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 4.6e-10 70.5 135 29.6
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 1.0e-09 69.3 157 31.2
Carub.0001s3406 Capsella rubella HOM05D003348 ORTHO05D000395 1.3e-09 68.9 140 29.3
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-09 68.6 157 30.6
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-09 68.2 157 30.6
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-09 68.2 157 30.6
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 2.3e-09 68.2 157 30.6
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 2.3e-09 68.2 157 30.6
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-09 67.8 157 30.6
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.9e-09 67.4 135 27.4
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-09 67.4 138 31.9
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 5.1e-09 67.0 157 30.6
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.7e-09 66.6 138 29.7
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.5e-08 64.7 529 22.3
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 3.3e-08 64.3 64 45.3
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 5.7e-08 63.5 157 29.9
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 5.7e-08 63.5 157 29.3
BcaB04g17835 Brassica carinata HOM05D003348 ORTHO05D091710 7.4e-08 63.2 63 60.3
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 9.6e-08 62.8 157 28.7
Sp1g31930 Schrenkiella parvula HOM05D010384 ORTHO05D013516 2.1e-07 61.6 119 28.6
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 60.8 157 29.3
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-07 60.8 157 29.3
A06p21910 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-07 60.5 140 24.3
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.8e-07 60.5 140 26.4
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.8e-07 60.5 156 29.5
A06p23380 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-07 60.1 140 24.3
C08p14260 Brassica napus HOM05D000975 ORTHO05D003128 8.2e-07 59.7 140 23.6
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.2e-07 59.7 142 26.1
BolC3t17625H Brassica oleracea HOM05D003348 ORTHO05D013252 1.1e-06 59.3 211 28.4
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-06 59.3 157 29.9
A03p68240 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-06 58.9 140 23.6
A05p27730 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-06 58.9 140 23.6
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 58.9 158 29.7
C05p33140 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-06 58.5 171 22.2
BcaC03g15685 Brassica carinata HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 22.9
A03p63360 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 23.6
A05p31270 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 23.6
A09p24160 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 23.6
A09p29830 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 23.6
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 23.6
BolC2t09407H Brassica oleracea HOM05D000975 ORTHO05D003128 2.4e-06 58.2 140 22.9
Thhalv10012042m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.4e-06 58.2 157 27.4
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-06 57.8 140 22.9
A01p28020 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-06 57.8 158 22.8
C02p45180 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-06 57.8 171 22.2
C02p51080 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-06 57.8 140 22.9
C03p53650 Brassica napus HOM05D003348 ORTHO05D013252 3.1e-06 57.8 209 28.2
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 4.1e-06 57.4 141 22.7
BcaC05g25804 Brassica carinata HOM05D000471 ORTHO05D000199 4.1e-06 57.4 66 39.4
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-06 57.4 158 22.8
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-06 57.4 145 24.1
BolC2t10303H Brassica oleracea HOM05D000471 ORTHO05D000199 4.1e-06 57.4 129 31.0
BolC5t30444H Brassica oleracea HOM05D000471 ORTHO05D010016 4.1e-06 57.4 66 39.4
Thhalv10002160m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.1e-06 57.4 157 26.8
Thhalv10021988m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 4.1e-06 57.4 165 28.5
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 5.3e-06 57.0 146 32.2
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 5.3e-06 57.0 140 22.9
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 5.3e-06 57.0 54 48.1
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 5.3e-06 57.0 54 48.1
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 5.3e-06 57.0 54 48.1
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.9e-06 56.6 83 39.8
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 6.9e-06 56.6 140 22.9
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.9e-06 56.6 156 27.6
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.9e-06 56.6 156 26.3


User provided reference genes

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