Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.1e-157 560.1 326 100.0
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.4e-139 500.0 324 90.1
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.2e-138 496.9 326 89.3
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 1.6e-138 496.5 324 89.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.8e-137 491.9 324 88.6
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 5.5e-136 488.0 298 98.0
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 9.4e-136 487.3 326 87.4
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 4.7e-135 485.0 326 89.9
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 4.7e-135 485.0 326 89.9
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.9e-129 465.7 326 86.5
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.5e-125 453.4 321 84.1
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 1.5e-125 453.4 321 82.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.9e-120 436.4 332 80.7
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 2.8e-103 379.4 324 72.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 3.2e-99 365.9 329 70.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.0e-98 363.2 324 69.1
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 4.6e-98 362.1 324 69.8
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 7.8e-98 361.3 329 67.8
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.0e-97 360.9 332 68.7
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 2.3e-97 359.8 323 68.1
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 5.0e-97 358.6 332 68.1
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.3e-96 355.5 327 67.6
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 5.6e-96 355.1 330 64.8
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 9.5e-96 354.4 331 65.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 9.5e-96 354.4 314 64.3
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 2.8e-95 352.8 329 69.6
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 6.2e-95 351.7 319 67.1
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.4e-94 350.5 319 67.4
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.4e-94 350.5 328 62.5
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.3e-94 349.7 334 68.3
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.2e-94 348.6 322 64.9
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 5.2e-94 348.6 319 68.7
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 6.8e-94 348.2 326 66.6
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 8.9e-94 347.8 326 68.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.0e-93 346.7 326 68.1
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.4e-93 345.9 326 68.1
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 2.9e-92 342.8 323 62.8
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 2.9e-92 342.8 321 66.4
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 3.7e-92 342.4 332 64.5
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 3.7e-92 342.4 318 67.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.4e-91 339.7 337 63.2
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 9.2e-91 337.8 324 65.4
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.7e-90 336.3 327 67.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.7e-89 333.6 326 63.8
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 3.0e-89 332.8 327 66.7
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 5.1e-89 332.0 324 63.6
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.1e-88 330.9 354 57.1
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.5e-88 330.5 326 66.0
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 3.3e-88 329.3 323 67.8
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 4.7e-87 325.5 321 64.5
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.8e-86 323.6 318 65.7
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.0e-86 322.4 324 63.0
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.2e-86 322.0 322 63.0
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 5.2e-86 322.0 317 65.9
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 8.9e-86 321.2 324 62.3
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 8.9e-86 321.2 321 58.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.2e-85 320.9 316 64.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 2.0e-85 320.1 318 66.7
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.4e-85 318.9 324 60.5
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.4e-85 318.9 322 63.0
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 5.8e-85 318.5 169 91.7
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 9.9e-85 317.8 322 63.7
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.3e-84 317.4 318 63.5
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.7e-84 317.0 322 63.0
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.8e-84 315.8 322 63.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 4.9e-84 315.5 349 53.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 6.4e-84 315.1 321 63.9
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-83 313.9 318 63.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.1e-83 312.4 319 63.6
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 4.1e-83 312.4 328 62.8
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 7.1e-83 311.6 323 60.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 9.2e-83 311.2 330 55.2
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.2e-82 310.8 328 61.9
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.2e-82 310.8 328 61.9
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 6.0e-82 308.5 349 53.3
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.5e-80 303.9 322 62.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.5e-80 303.1 326 62.6
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 4.3e-80 302.4 317 61.8
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.3e-80 301.6 320 60.6
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 1.6e-79 300.4 317 61.5
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.7e-79 298.9 323 56.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 6.2e-79 298.5 324 57.1
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 8.1e-79 298.1 327 58.4
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 8.1e-79 298.1 323 59.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.6e-77 293.1 344 48.0
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.7e-76 290.4 318 60.7
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.9e-76 289.7 324 59.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 8.4e-76 288.1 332 57.2
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.9e-75 287.0 327 52.0
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 4.2e-75 285.8 321 60.4
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.6e-74 283.9 321 60.4
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 2.1e-74 283.5 319 60.2
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.3e-72 276.2 204 68.1
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.7e-68 263.8 321 54.8
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.9e-68 263.1 313 57.2
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 3.0e-65 253.1 320 54.1
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 6.2e-63 245.4 327 56.0
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 1.7e-60 237.3 283 59.0
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.8e-60 236.1 331 42.0
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.8e-60 236.1 323 52.3
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.7e-58 229.9 167 65.3
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.6e-55 220.7 167 62.3
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.0e-52 211.5 170 57.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.3e-52 211.1 256 46.5
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.4e-52 208.4 166 58.4
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.2e-51 206.5 205 50.2
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.5e-50 203.0 166 57.8
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.8e-49 200.7 207 48.8
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 9.7e-48 194.9 168 57.1
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.6e-47 194.1 163 56.4
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.4e-46 190.3 193 49.2
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.5e-43 180.3 168 51.2
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.5e-40 171.0 187 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.0e-33 148.3 213 57.7
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 4.5e-29 132.9 350 36.9
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 5.0e-28 129.4 101 62.4
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.5e-27 127.1 97 62.9
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 6.1e-26 122.5 251 29.9
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 2.0e-24 117.5 62 93.5
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 6.3e-23 112.5 170 38.2
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 6.3e-23 112.5 76 68.4
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 8.2e-23 112.1 69 76.8
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.1e-22 111.7 74 68.9
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 5.9e-21 105.9 253 45.8
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.9e-19 100.9 338 28.7
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 8.8e-17 92.0 88 52.3
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 2.5e-11 73.9 48 66.7
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 2.7e-10 70.5 177 27.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 8.0e-10 68.9 128 35.2
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.6e-08 63.9 54 59.3
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 9.8e-08 62.0 124 34.7
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 2.2e-07 60.8 143 29.4
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 5.4e-06 56.2 86 44.2
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.0e-06 55.8 45 60.0


User provided reference genes

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