Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 1.2e-143 513.1 254 100.0
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 4.7e-143 511.1 254 99.6
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.1e-139 500.0 254 97.6
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.1e-139 500.0 254 97.6
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 3.9e-137 491.5 244 100.0
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.8e-134 482.6 256 94.9
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.9e-115 419.5 252 81.3
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.2e-115 418.7 246 85.4
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.7e-114 415.6 253 82.2
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 1.4e-102 376.7 253 72.3
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 4.4e-80 302.0 250 61.6
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.6e-74 283.5 168 85.7
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 5.7e-72 275.0 168 83.9
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 8.3e-71 271.2 168 83.3
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 7.7e-61 238.0 227 52.4
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.6e-58 229.2 236 50.0
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.3e-57 226.5 241 52.7
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 5.2e-57 225.3 234 52.6
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 6.8e-57 224.9 238 51.7
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 2.6e-56 223.0 231 50.6
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 3.7e-55 219.2 231 49.8
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 6.4e-55 218.4 237 49.4
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 8.3e-55 218.0 241 46.9
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 8.3e-55 218.0 228 52.2
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 8.3e-55 218.0 237 48.5
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 4.1e-54 215.7 246 48.8
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 5.4e-54 215.3 231 49.8
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.0e-54 214.9 237 49.4
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 9.2e-54 214.5 242 47.9
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.2e-53 214.2 233 48.5
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.6e-53 213.8 240 46.7
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.6e-53 213.8 238 47.9
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 2.0e-53 213.4 239 49.0
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.7e-53 213.0 237 48.9
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 3.5e-53 212.6 230 50.9
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 3.5e-53 212.6 234 49.1
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 1.3e-52 210.7 228 50.0
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.7e-52 210.3 228 50.0
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.7e-52 210.3 240 49.2
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 3.0e-52 209.5 239 45.6
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 3.9e-52 209.1 249 45.0
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 6.6e-52 208.4 237 47.3
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 8.6e-52 208.0 244 47.1
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.5e-51 207.2 234 47.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 1.9e-51 206.8 255 43.9
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.9e-51 206.8 246 46.3
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.3e-51 205.7 258 44.2
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 4.3e-51 205.7 228 48.2
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 9.5e-51 204.5 235 48.9
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 9.5e-51 204.5 228 48.7
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.2e-50 204.1 239 48.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.1e-50 203.4 246 46.3
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 2.1e-50 203.4 225 48.4
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.8e-50 203.0 246 46.3
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 3.6e-50 202.6 247 44.1
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 4.7e-50 202.2 249 46.6
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 4.7e-50 202.2 229 49.3
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.8e-49 200.3 234 47.0
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.8e-49 200.3 240 46.7
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 4.0e-49 199.1 250 44.0
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 3.4e-48 196.1 229 47.6
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 4.4e-48 195.7 251 43.0
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 5.8e-48 195.3 237 48.1
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 7.5e-48 194.9 232 45.7
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.2e-47 193.4 231 44.2
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 2.2e-47 193.4 230 47.0
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 6.4e-47 191.8 237 46.4
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 8.3e-47 191.4 236 44.1
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 8.3e-47 191.4 231 44.6
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 1.1e-46 191.0 237 45.1
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 1.4e-46 190.7 244 44.7
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 9.2e-46 188.0 229 45.0
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.6e-45 187.2 247 42.9
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.0e-45 186.8 235 45.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 2.7e-45 186.4 226 44.7
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 6.0e-45 185.3 230 45.7
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 6.6e-44 181.8 229 43.2
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 6.6e-44 181.8 250 42.0
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.1e-43 181.0 235 44.7
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.1e-43 181.0 250 42.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.9e-43 180.3 235 45.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 3.3e-43 179.5 244 43.9
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 5.6e-43 178.7 228 43.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 8.1e-42 174.9 235 43.8
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 2.3e-41 173.3 253 41.1
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 2.0e-40 170.2 217 43.3
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 5.8e-40 168.7 232 44.8
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.2e-39 166.8 230 40.4
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 1.1e-38 164.5 236 41.5
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 3.5e-37 159.5 231 38.5
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 7.8e-37 158.3 229 41.0
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 1.7e-36 157.1 158 51.3
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 3.0e-36 156.4 232 39.2
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 8.6e-36 154.8 232 40.9
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.1e-33 147.9 193 45.1
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 5.2e-33 145.6 161 49.7
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 6.4e-31 138.7 298 31.9
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.4e-30 135.6 248 35.1
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 1.6e-29 134.0 165 47.3
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 2.1e-29 133.7 253 31.6
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 3.5e-29 132.9 296 30.7
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-28 130.2 165 44.2
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 1.1e-27 127.9 147 51.0
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.5e-27 127.5 228 36.0
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 4.7e-26 122.5 230 32.2
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.0e-24 117.1 159 41.5
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 6.0e-21 105.5 100 51.0
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 6.0e-21 105.5 145 42.1
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.8e-18 96.7 115 44.3
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 3.8e-15 86.3 62 61.3
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.2e-14 83.2 343 23.6
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 2.1e-13 80.5 79 48.1
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.3e-12 77.8 87 50.6
BcaB05g23239 Brassica carinata HOM05D054959 ORTHO05D008344 1.5e-11 74.3 55 72.7
BcaB07g32929 Brassica carinata HOM05D054959 ORTHO05D008344 4.3e-11 72.8 44 79.5
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.6e-11 72.4 111 41.4
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 2.8e-10 70.1 146 35.6
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 6.2e-10 68.9 80 45.0
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 8.1e-10 68.6 151 34.4
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.1e-09 68.2 84 44.0
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.4e-09 67.8 85 42.4
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.3e-07 61.2 66 45.5
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 1.1e-06 58.2 79 38.0


User provided reference genes

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