Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p26250 Brassica napus HOM05D000519 ORTHO05D000959 1.8e-27 125.2 63 100.0
C01p26270 Brassica napus HOM05D000519 ORTHO05D000959 4.6e-23 110.5 63 88.9
A01p20920 Brassica napus HOM05D000519 ORTHO05D000959 3.0e-22 107.8 63 85.7
A01p20960 Brassica napus HOM05D000519 ORTHO05D000959 1.1e-21 105.9 63 84.1
BraA01t02013Z Brassica rapa HOM05D000519 ORTHO05D000959 1.5e-21 105.5 62 83.9
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 2.5e-21 104.8 62 83.9
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 2.5e-21 104.8 62 83.9
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 7.4e-21 103.2 62 83.9
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 3.7e-20 100.9 62 79.0
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 3.7e-20 100.9 62 79.0
Thhalv10026611m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 2.4e-19 98.2 62 77.4
CARHR222900 Cardamine hirsuta HOM05D000519 ORTHO05D000959 9.0e-19 96.3 62 75.8
BcaNung00187 Brassica carinata HOM05D000519 ORTHO05D000959 5.0e-17 90.5 62 72.6
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 9.3e-16 86.3 62 71.0
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 2.7e-15 84.7 62 71.0
C01p26260 Brassica napus HOM05D000519 ORTHO05D000959 3.0e-14 81.3 58 72.4
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 8.7e-14 79.7 60 66.7
A01p20930 Brassica napus HOM05D000519 ORTHO05D000959 4.3e-13 77.4 58 67.2
A01p20940 Brassica napus HOM05D000519 ORTHO05D000959 4.3e-13 77.4 58 67.2
BraA01t02011Z Brassica rapa HOM05D000519 ORTHO05D000959 4.3e-13 77.4 58 67.2
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 2.2e-12 75.1 62 61.3
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 6.3e-12 73.6 61 60.7
Cpa.g.sc75.103 Carica papaya HOM05D000519 ORTHO05D000959 6.5e-09 63.5 62 53.2
Aa31LG2G12600 Aethionema arabicum HOM05D000519 ORTHO05D000959 8.5e-09 63.2 62 51.6
Haze_09252 Corylus avellana HOM05D000519 ORTHO05D000959 1.9e-08 62.0 58 55.2
Eucgr.E03919 Eucalyptus grandis HOM05D000519 ORTHO05D000959 2.5e-08 61.6 62 50.0
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.2e-08 61.2 62 50.0
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.2e-08 61.2 62 50.0
Sp7g15060 Schrenkiella parvula HOM05D000519 ORTHO05D016725 4.2e-08 60.8 58 51.7
TPR.G30458 Trifolium pratense HOM05D000519 ORTHO05D000959 4.2e-08 60.8 62 53.2
Aa31LG2G12580 Aethionema arabicum HOM05D000519 ORTHO05D000959 5.5e-08 60.5 62 50.0
CARHR173800 Cardamine hirsuta HOM05D000519 ORTHO05D000959 7.2e-08 60.1 59 52.5
QL05p069227 Quercus lobata HOM05D000519 ORTHO05D000959 9.4e-08 59.7 61 49.2
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 9.4e-08 59.7 58 48.3
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.2e-07 59.3 62 46.8
Cfa019521 Carpinus fangiana HOM05D000519 ORTHO05D000959 1.6e-07 58.9 58 53.4
Nn3g21163 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.6e-07 58.9 62 46.8
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 1.6e-07 58.9 59 49.2
CSS0015208 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.1e-07 58.5 62 53.2
Medtr4g133540 Medicago truncatula HOM05D000519 ORTHO05D000959 2.1e-07 58.5 58 48.3
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 2.7e-07 58.2 60 50.0
Glyma.15G115300 Glycine max HOM05D000519 ORTHO05D000959 3.6e-07 57.8 61 52.5
AL8G10420 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 4.6e-07 57.4 59 49.2
CSS0026174 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 4.6e-07 57.4 62 51.6
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 6.1e-07 57.0 57 50.9
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 6.1e-07 57.0 62 46.8
BcaC06g33484 Brassica carinata HOM05D000519 ORTHO05D016725 1.0e-06 56.2 62 51.6
BcaC06g33485 Brassica carinata HOM05D000519 ORTHO05D016725 1.0e-06 56.2 62 51.6
BcaNung02871 Brassica carinata HOM05D000519 ORTHO05D016725 1.0e-06 56.2 62 51.6
C07p47950 Brassica napus HOM05D000519 ORTHO05D016725 1.0e-06 56.2 62 51.6
BolC7t45318H Brassica oleracea HOM05D000519 ORTHO05D016725 1.0e-06 56.2 62 51.6
CAN.G449.20 Capsicum annuum HOM05D000519 ORTHO05D000959 1.0e-06 56.2 63 49.2
Eucgr.E03921 Eucalyptus grandis HOM05D000519 ORTHO05D000959 1.0e-06 56.2 61 47.5
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.0e-06 56.2 45 60.0
vmacro15764 Vaccinium macrocarpon HOM05D000519 ORTHO05D000959 1.4e-06 55.8 57 52.6
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 1.8e-06 55.5 59 47.5
A06p44980 Brassica napus HOM05D000519 ORTHO05D000959 1.8e-06 55.5 65 49.2
BraA06t27369Z Brassica rapa HOM05D000519 ORTHO05D000959 1.8e-06 55.5 65 49.2
Ciclev10002632m.g Citrus clementina HOM05D000519 ORTHO05D000959 1.8e-06 55.5 61 44.3
Phvul.006G142600 Phaseolus vulgaris HOM05D000519 ORTHO05D000959 1.8e-06 55.5 61 47.5
QL05p069213 Quercus lobata HOM05D000519 ORTHO05D000959 1.8e-06 55.5 58 48.3
HPP92_024483 Vanilla planifolia HOM05D000519 ORTHO05D000959 2.3e-06 55.1 45 57.8
Aa31sc118G120 Aethionema arabicum HOM05D000519 ORTHO05D000959 3.0e-06 54.7 59 45.8
BcaC06g34241 Brassica carinata HOM05D000519 ORTHO05D000959 3.0e-06 54.7 64 50.0
BcaNung00188 Brassica carinata HOM05D000519 ORTHO05D000959 3.0e-06 54.7 46 60.9
C07p31200 Brassica napus HOM05D000519 ORTHO05D000959 3.0e-06 54.7 64 50.0
BolC7t43661H Brassica oleracea HOM05D000519 ORTHO05D000959 3.0e-06 54.7 64 50.0
CANSAT56G2160 Cannabis sativa HOM05D000519 ORTHO05D000959 3.0e-06 54.7 62 46.8
Carub.0004s1417 Capsella rubella HOM05D000519 ORTHO05D000959 3.9e-06 54.3 60 50.0
Lalb_Chr17g0347761 Lupinus albus HOM05D000519 ORTHO05D001210 3.9e-06 54.3 61 45.9
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 3.9e-06 54.3 61 44.3
Phvul.003G084300 Phaseolus vulgaris HOM05D000519 ORTHO05D000959 3.9e-06 54.3 58 48.3
Psat1g175600 Pisum sativum HOM05D000519 ORTHO05D000959 3.9e-06 54.3 61 45.9
Sc16g0010850 Simmondsia chinensis HOM05D000519 ORTHO05D001210 3.9e-06 54.3 61 50.8
TWI59G0838 Tripterygium wilfordii HOM05D000519 ORTHO05D000959 3.9e-06 54.3 57 49.1
AL4G28250 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 5.1e-06 53.9 59 45.8
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 5.1e-06 53.9 59 45.8
BcaC06g31374 Brassica carinata HOM05D000519 ORTHO05D000959 5.1e-06 53.9 64 48.4
A03p49900 Brassica napus HOM05D000519 ORTHO05D016725 5.1e-06 53.9 63 54.0
BraA03t14084Z Brassica rapa HOM05D000519 ORTHO05D016725 5.1e-06 53.9 63 54.0
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 5.1e-06 53.9 59 50.8
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 5.1e-06 53.9 59 47.5
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 6.7e-06 53.5 61 45.9
Eucgr.E03923 Eucalyptus grandis HOM05D000519 ORTHO05D000959 6.7e-06 53.5 61 44.3
PGSC0003DMG400005950 Solanum tuberosum HOM05D000519 ORTHO05D019510 6.7e-06 53.5 59 42.4
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 8.8e-06 53.1 58 48.3
Ciclev10017209m.g Citrus clementina HOM05D000519 ORTHO05D000959 8.8e-06 53.1 59 45.8
HanXRQChr04g0096521 Helianthus annuus HOM05D000519 ORTHO05D000959 8.8e-06 53.1 59 47.5
Rhsim02G0101200 Rhododendron simsii HOM05D000519 ORTHO05D000959 8.8e-06 53.1 58 51.7


User provided reference genes

Program Settings