Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.3e-87 325.5 161 100.0
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.3e-87 325.5 161 100.0
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 9.9e-46 187.2 133 75.2
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 9.9e-46 187.2 133 76.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.1e-44 183.7 133 75.2
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.9e-44 183.0 133 73.7
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 9.3e-44 180.6 133 71.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.6e-43 179.9 133 73.7
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.6e-43 179.9 133 72.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-43 179.9 133 72.9
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.8e-42 176.4 133 72.2
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 2.3e-42 176.0 133 69.2
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 3.0e-42 175.6 133 70.7
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.6e-40 169.9 133 68.4
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.6e-40 169.9 133 67.7
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.6e-40 169.9 133 67.7
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.8e-40 169.1 133 66.2
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 3.7e-40 168.7 134 66.4
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 3.7e-40 168.7 133 66.2
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 3.7e-40 168.7 133 69.9
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 3.7e-40 168.7 133 66.9
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 6.2e-40 167.9 133 66.9
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 8.2e-40 167.5 133 68.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.1e-39 167.2 139 63.3
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.4e-39 166.8 133 67.7
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.4e-39 166.8 133 64.7
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.4e-39 166.0 133 68.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 4.0e-39 165.2 133 65.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 4.0e-39 165.2 133 69.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.3e-39 164.9 133 66.2
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 6.9e-39 164.5 133 63.9
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 9.0e-39 164.1 133 66.2
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 9.0e-39 164.1 135 63.0
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 9.0e-39 164.1 133 65.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 9.0e-39 164.1 133 65.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-38 163.7 133 65.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-38 163.7 133 64.7
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.5e-38 163.3 133 63.9
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.5e-38 163.3 138 65.9
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.5e-38 163.3 135 63.7
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.6e-38 162.5 133 64.7
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.6e-38 162.5 133 67.7
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.6e-38 162.5 133 65.4
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 3.4e-38 162.2 133 66.9
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 3.4e-38 162.2 133 63.2
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.4e-38 162.2 133 65.4
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 4.5e-38 161.8 133 64.7
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.5e-38 161.8 133 65.4
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.5e-38 161.8 133 65.4
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 7.6e-38 161.0 133 66.9
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 1.0e-37 160.6 133 63.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.0e-37 160.6 140 62.1
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.3e-37 160.2 133 63.9
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.7e-37 159.8 133 61.7
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.7e-37 159.8 132 62.9
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 2.9e-37 159.1 133 61.7
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 6.5e-37 157.9 133 64.7
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.1e-36 157.1 133 63.2
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.4e-36 156.8 138 60.9
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.5e-36 156.0 133 60.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 2.5e-36 156.0 133 62.4
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 2.5e-36 156.0 134 61.9
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.5e-36 156.0 139 59.7
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 2.5e-36 156.0 138 61.6
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 3.2e-36 155.6 133 62.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.2e-36 155.6 135 61.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 5.5e-36 154.8 133 60.9
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 7.1e-36 154.5 135 61.5
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 9.3e-36 154.1 138 58.7
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.2e-35 153.7 132 62.1
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.6e-35 153.3 132 61.4
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.6e-35 153.3 133 61.7
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.6e-35 153.3 138 60.1
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.6e-35 153.3 138 58.0
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.1e-35 152.9 132 61.4
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 2.7e-35 152.5 133 60.2
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 7.9e-35 151.0 133 60.2
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.0e-34 150.6 132 60.6
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.0e-34 150.6 133 60.2
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.0e-34 150.6 133 60.2
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.0e-34 150.6 133 60.2
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-34 150.2 140 59.3
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.3e-34 150.2 135 58.5
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.8e-34 149.8 132 58.3
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.3e-34 149.4 156 55.1
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.9e-34 148.7 140 59.3
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 3.9e-34 148.7 173 51.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.5e-33 146.0 135 57.0
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 5.7e-33 144.8 140 53.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 6.3e-32 141.4 134 56.0
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.8e-31 139.8 178 47.8
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.4e-31 139.4 109 70.6
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 5.3e-31 138.3 135 55.6
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 6.9e-31 137.9 135 53.3
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 4.5e-30 135.2 128 57.0
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.8e-29 132.1 110 61.8
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.9e-28 129.8 191 44.0
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 5.5e-28 128.3 125 62.4
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 1.2e-27 127.1 125 62.4
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.8e-26 123.2 123 55.3
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 4.3e-25 118.6 135 49.6
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 3.1e-23 112.5 110 52.7
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.8e-21 105.5 104 53.8
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 7.9e-19 97.8 90 57.8
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 5.3e-15 85.1 279 28.3
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 9.1e-15 84.3 137 35.0
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.5e-14 83.6 85 55.3
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 6.5e-13 78.2 57 70.2
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.4e-12 77.0 137 37.2
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.2e-12 75.9 55 70.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 2.1e-11 73.2 59 64.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 2.0e-09 66.6 54 63.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 7.4e-09 64.7 134 31.3
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.4e-07 59.7 39 69.2
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 9.1e-07 57.8 60 53.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.6e-06 56.2 57 52.6


User provided reference genes

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