Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p25640 Brassica napus HOM05D004613 ORTHO05D006095 1.3e-137 493.0 251 100.0
C09p23030 Brassica napus HOM05D004613 ORTHO05D006095 7.4e-72 274.6 150 92.7
BolC8t47558H Brassica oleracea HOM05D004613 ORTHO05D006095 2.2e-60 236.5 132 89.4
C07p27290 Brassica napus HOM05D004613 ORTHO05D040533 5.0e-60 235.3 167 76.6
BolC7t43257H Brassica oleracea HOM05D004613 ORTHO05D040533 8.5e-60 234.6 167 76.6
BcaC07g37284 Brassica carinata HOM05D004613 ORTHO05D006095 1.4e-57 227.3 124 91.9
BolC1t02515H Brassica oleracea HOM05D004613 ORTHO05D006095 4.2e-43 179.1 165 65.5
BcaC09g50421 Brassica carinata HOM05D004613 ORTHO05D006095 4.7e-42 175.6 89 97.8
BolC4t23587H Brassica oleracea HOM05D004613 ORTHO05D006095 4.7e-42 175.6 111 82.0
BcaC09g50422 Brassica carinata HOM05D004613 ORTHO05D092911 6.7e-41 171.8 84 98.8
BcaC04g22128 Brassica carinata HOM05D004613 ORTHO05D006095 8.8e-41 171.4 89 94.4
C05p42320 Brassica napus HOM05D004613 ORTHO05D006095 1.6e-37 160.6 91 87.9
C04p31600 Brassica napus HOM05D004613 ORTHO05D006095 8.5e-36 154.8 91 85.7
C09p29080 Brassica napus HOM05D004613 ORTHO05D006095 7.2e-35 151.8 91 84.6
C03p71850 Brassica napus HOM05D004613 ORTHO05D006095 1.8e-33 147.1 88 84.1
C09p20670 Brassica napus HOM05D004613 ORTHO05D006095 2.8e-31 139.8 93 78.5
C02p33910 Brassica napus HOM05D004613 ORTHO05D006095 2.4e-30 136.7 88 83.0
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 1.5e-24 117.5 142 53.5
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 6.3e-23 112.1 96 63.5
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 6.3e-23 112.1 96 63.5
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 6.3e-23 112.1 86 69.8
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.8e-22 110.5 86 68.6
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.8e-22 110.5 86 68.6
C04p09800 Brassica napus HOM05D004613 ORTHO05D006095 2.4e-22 110.2 61 86.9
C04p20640 Brassica napus HOM05D004613 ORTHO05D006095 3.1e-22 109.8 58 89.7
BolC4t23591H Brassica oleracea HOM05D004613 ORTHO05D006095 3.1e-22 109.8 58 89.7
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 4.1e-22 109.4 86 67.4
BolC5t32960H Brassica oleracea HOM05D004613 ORTHO05D006095 2.0e-21 107.1 58 87.9
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 2.7e-21 106.7 55 90.9
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.0e-20 104.8 59 84.7
C08p07130 Brassica napus HOM05D004613 ORTHO05D014940 2.9e-20 103.2 159 46.5
C03p78440 Brassica napus HOM05D012085 ORTHO05D006095 5.0e-20 102.4 56 85.7
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.6e-18 97.4 86 64.0
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 2.1e-18 97.1 86 62.8
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 2.8e-18 96.7 86 61.6
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 2.8e-18 96.7 86 61.6
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 3.6e-18 96.3 86 62.8
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 5.4e-14 82.4 87 55.2
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 1.1e-11 74.7 70 50.0
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 3.6e-10 69.7 76 42.1
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 1.8e-09 67.4 58 53.4
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 4.0e-09 66.2 56 53.6
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 6.8e-09 65.5 58 55.2
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 1.2e-08 64.7 76 47.4
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 9.8e-08 61.6 58 51.7
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 1.3e-07 61.2 58 46.6
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 1.3e-07 61.2 58 50.0
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 1.7e-07 60.8 56 60.7
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 1.7e-07 60.8 73 45.2
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 1.7e-07 60.8 56 48.2
BcaC02g11089 Brassica carinata HOM05D000249 ORTHO05D032228 2.2e-07 60.5 32 81.2
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 2.2e-07 60.5 58 48.3
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 3.7e-07 59.7 58 48.3
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 4.9e-07 59.3 58 50.0
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 6.4e-07 58.9 54 51.9
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 8.3e-07 58.5 58 48.3
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 8.3e-07 58.5 58 48.3
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 8.3e-07 58.5 69 44.9
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 1.1e-06 58.2 54 48.1
BcaC04g20970 Brassica carinata HOM05D004613 ORTHO05D014940 1.1e-06 58.2 49 63.3
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 1.1e-06 58.2 54 48.1
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 1.1e-06 58.2 58 44.8
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.1e-06 58.2 90 41.1
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 1.4e-06 57.8 58 48.3
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 1.9e-06 57.4 64 51.6
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 2.4e-06 57.0 58 46.6
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 3.2e-06 56.6 58 50.0
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 3.2e-06 56.6 66 45.5
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 3.2e-06 56.6 59 47.5
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 3.2e-06 56.6 59 47.5
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 4.1e-06 56.2 44 59.1
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 4.1e-06 56.2 58 48.3
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 4.1e-06 56.2 85 38.8
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 4.1e-06 56.2 46 54.3
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 5.4e-06 55.8 58 50.0
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 7.0e-06 55.5 55 52.7
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 7.0e-06 55.5 58 48.3
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 9.2e-06 55.1 58 48.3
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 9.2e-06 55.1 58 44.8
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 9.2e-06 55.1 48 50.0


User provided reference genes

Program Settings